RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 PCDH1Q08174 1060 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ACSM2AQ08AH3 577 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NPRL3Q12980 569 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LAPTM5Q13571 262 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RAPSNQ13702 412 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GTF2H3Q13889 308 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MRPL58Q14197 206 aaKnown RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GNA13Q14344 377 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PTGR1Q14914 329 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MAD2L1BPQ15013 274 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ABRAXAS2Q15018 415 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 KIAA0040Q15053 153 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NCF4Q15080 339 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TAB1Q15750 504 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NPTX1Q15818 432 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 BCL2A1Q16548 175 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MEP1AQ16819 746 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF630Q2M218 657 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZIK1Q3SY52 487 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SYTL3Q4VX76 610 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RFTN2Q52LD8 501 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 IFI44LQ53G44 452 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 USP39Q53GS9 565 aaKnown RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PAGE2BQ5JRK9 111 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SPANXN4Q5MJ08 99 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DEPDC1Q5TB30 811 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FAM171A1Q5VUB5 890 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MEDAGQ5VYS4 303 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FRG2Q64ET8 278 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ACSM2BQ68CK6 577 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TPGS2Q68CL5 300 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GDF6Q6KF10 455 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CES5AQ6NT32 575 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PSAPL1Q6NUJ1 521 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TMEM53Q6P2H8 277 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FAHD1Q6P587 224 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NCEH1Q6PIU2 408 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ENPP6Q6UWR7 440 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ISLR2Q6UXK2 745 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 UNC5DQ6UXZ4 953 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CCDC81Q6ZN84 652 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 IKBIPQ70UQ0 350 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RPS27LQ71UM5 84 aaKnown RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CBLL1Q75N03 491 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 B3GNT8Q7Z7M8 397 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LDB1Q86U70 411 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LRRTM3Q86VH5 581 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CYP4Z1Q86W10 505 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SERPINA9Q86WD7 417 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CCDC103Q8IW40 242 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NPAS3Q8IXF0 933 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RGL4Q8IZJ4 473 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TAGAPQ8N103 731 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NXPE1Q8N323 547 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 STX19Q8N4C7 294 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 IL17RCQ8NAC3 791 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRPV1Q8NER1 839 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RHOXF1Q8NHV9 184 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DYNC2LI1Q8TCX1 351 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FAR1Q8WVX9 515 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ASZ1Q8WWH4 475 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 LPPQ93052 612 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 IGSF8Q969P0 613 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 KIAA1143Q96AT1 154 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 YIPF6Q96EC8 236 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 MOCOSQ96EN8 888 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FCRL1Q96LA6 429 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TEX37Q96LM6 180 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TEFMQ96QE5 360 aaKnown RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FRG2BQ96QU4 278 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZNF300Q96RE9 604 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NEURL2Q9BR09 285 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 COPS4Q9BT78 406 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TTPALQ9BTX7 342 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DOHHQ9BU89 302 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRAF4Q9BUZ4 470 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 APOL5Q9BWW9 433 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SLC12A9Q9BXP2 914 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZCCHC2Q9C0B9 1178 aaKnown RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 AMBRA1Q9C0C7 1298 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 BHLHE41Q9C0J9 482 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 DCSTAMPQ9H295 470 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 RIBC2Q9H4K1 309 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NSUN3Q9H649 340 aaKnown RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ASB8Q9H765 288 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 TRIM45Q9H8W5 580 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SPON1Q9HCB6 807 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZFP14Q9HCL3 533 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 NEUROD4Q9HD90 331 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ACSS2Q9NR19 701 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 CLN6Q9NWW5 311 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZSCAN32Q9NX65 697 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 ZDHHC3Q9NYG2 299 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FLRT1Q9NZU1 646 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 PDP1Q9P0J1 537 aaPredicted RBP3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 GALPQ9UBC7 116 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 SPASTQ9UBP0 616 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 VPS29Q9UBQ0 182 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 FKBPLQ9UIM3 349 aa3.28□□□□□ -1.88
RNU4ATAC3P-201ENST00000516699 OSGIN1Q9UJX0 560 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms