RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 FGF5P12034 268 aa3□□□□□ -1.93
HERC4-215ENST00000515753 PRLRP16471 622 aa3□□□□□ -1.93
HERC4-215ENST00000515753 GJA1P17302 382 aa3□□□□□ -1.93
HERC4-215ENST00000515753 DESP17661 470 aa3□□□□□ -1.93
HERC4-215ENST00000515753 ANXA7P20073 488 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 IL10P22301 178 aa3□□□□□ -1.93
HERC4-215ENST00000515753 HRH2P25021 359 aa3□□□□□ -1.93
HERC4-215ENST00000515753 CASP3P42574 277 aa3□□□□□ -1.93
HERC4-215ENST00000515753 SUOXP51687 545 aa3□□□□□ -1.93
HERC4-215ENST00000515753 ATP12AP54707 1039 aa3□□□□□ -1.93
HERC4-215ENST00000515753 EVCP57679 992 aa3□□□□□ -1.93
HERC4-215ENST00000515753 STX1BP61266 288 aa3□□□□□ -1.93
HERC4-215ENST00000515753 SIRPAP78324 504 aa3□□□□□ -1.93
HERC4-215ENST00000515753 ARF5P84085 180 aa3□□□□□ -1.93
HERC4-215ENST00000515753 PPIGQ13427 754 aaKnown RBP eCLIP3□□□□□ -1.93
HERC4-215ENST00000515753 ITGA7Q13683 1181 aa3□□□□□ -1.93
HERC4-215ENST00000515753 SLC35E4Q6ICL7 350 aa3□□□□□ -1.93
HERC4-215ENST00000515753 MOXD1Q6UVY6 613 aa3□□□□□ -1.93
HERC4-215ENST00000515753 PLXDC2Q6UX71 529 aa3□□□□□ -1.93
HERC4-215ENST00000515753 RAD9BQ6WBX8 426 aa3□□□□□ -1.93
HERC4-215ENST00000515753 ZNF534Q76KX8 674 aa3□□□□□ -1.93
HERC4-215ENST00000515753 HAUS6Q7Z4H7 955 aa3□□□□□ -1.93
HERC4-215ENST00000515753 CENPVQ7Z7K6 275 aaPredicted RBP3□□□□□ -1.93
HERC4-215ENST00000515753 CCDC190Q86UF4 302 aa3□□□□□ -1.93
HERC4-215ENST00000515753 AACSQ86V21 672 aa3□□□□□ -1.93
HERC4-215ENST00000515753 MFN1Q8IWA4 741 aa3□□□□□ -1.93
HERC4-215ENST00000515753 TIGD4Q8IY51 512 aa3□□□□□ -1.93
HERC4-215ENST00000515753 C1orf52Q8N6N3 182 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 CNBD1Q8NA66 436 aa3□□□□□ -1.93
HERC4-215ENST00000515753 ZNF485Q8NCK3 441 aa3□□□□□ -1.93
HERC4-215ENST00000515753 RBM15BQ8NDT2 890 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 CFAP61Q8NHU2 1237 aa3□□□□□ -1.93
HERC4-215ENST00000515753 PSMA8Q8TAA3 256 aa3□□□□□ -1.93
HERC4-215ENST00000515753 ZNF524Q96C55 264 aa3□□□□□ -1.93
HERC4-215ENST00000515753 FBXO17Q96EF6 278 aa3□□□□□ -1.93
HERC4-215ENST00000515753 PDLIM5Q96HC4 596 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 RMDN2Q96LZ7 410 aa3□□□□□ -1.93
HERC4-215ENST00000515753 AK8Q96MA6 479 aa3□□□□□ -1.93
HERC4-215ENST00000515753 ZNF830Q96NB3 372 aaPredicted RBP3□□□□□ -1.93
HERC4-215ENST00000515753 SPXQ9BT56 116 aa3□□□□□ -1.93
HERC4-215ENST00000515753 RBM4Q9BWF3 364 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 GFRA4Q9GZZ7 299 aa3□□□□□ -1.93
HERC4-215ENST00000515753 TNMDQ9H2S6 317 aa3□□□□□ -1.93
HERC4-215ENST00000515753 TFB2MQ9H5Q4 396 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 CHCHD3Q9NX63 227 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 HAO2Q9NYQ3 351 aa3□□□□□ -1.93
HERC4-215ENST00000515753 ZNF624Q9P2J8 865 aaPredicted RBP3□□□□□ -1.93
HERC4-215ENST00000515753 DNAJB4Q9UDY4 337 aa3□□□□□ -1.93
HERC4-215ENST00000515753 SEC23IPQ9Y6Y8 1000 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 ZC3H13Q5T200 1668 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 PRAG1Q86YV5 1406 aa3□□□□□ -1.93
HERC4-215ENST00000515753 EIF2AK4Q9P2K8 1649 aaKnown RBP3□□□□□ -1.93
HERC4-215ENST00000515753 CDC42BPAQ5VT25 1732 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 IQGAP1P46940 1657 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 A0A1B0GU03 582 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 OR2M5A3KFT3 312 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 SLC30A4O14863 429 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 DIAPH2O60879 1101 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 OLFM2O95897 454 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ZFYP08048 801 aaPredicted RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 LINGO3P0C6S8 592 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ACHEP22303 614 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 NR2F2P24468 414 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 PTPN3P26045 913 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 MAPK3P27361 379 aaPredicted RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 HSPA4P34932 840 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 PCGF2P35227 344 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 CD86P42081 329 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 MTHFRP42898 656 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 NAGLUP54802 743 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ASIC1P78348 528 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 IL1RL1Q01638 556 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 TEFQ10587 303 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 RPA4Q13156 261 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 CBX3Q13185 183 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 RCN2Q14257 317 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 PTPRCAPQ14761 206 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 LASP1Q14847 261 aaKnown RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 PPA1Q15181 289 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 FUT11Q495W5 492 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 C6orf136Q5SQH8 315 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 SFMBT2Q5VUG0 894 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ARHGAP17Q68EM7 881 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 KRT39Q6A163 491 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 SLC27A1Q6PCB7 646 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 ABRAXAS1Q6UWZ7 409 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 PPP1R21Q6ZMI0 780 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 PIWIL4Q7Z3Z4 852 aaKnown RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 HOOK3Q86VS8 718 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 LONP2Q86WA8 852 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 SYCP3Q8IZU3 236 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 WDSUB1Q8N9V3 476 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 GRAPLQ8TC17 118 aaPredicted RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 TM9SF4Q92544 642 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 TAF4BQ92750 862 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 LINC00615Q96LM1 132 aaPredicted RBP2.99□□□□□ -1.93
HERC4-215ENST00000515753 LRRC3BQ96PB8 259 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 F2RL3Q96RI0 385 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 CDRT15Q96T59 188 aa2.99□□□□□ -1.93
HERC4-215ENST00000515753 SEMA3CQ99985 751 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms