RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 AGAP4Q96P64 663 aa11.66□□□□□ -0.54
SNHG4-208ENST00000514110 ACAT2Q9BWD1 397 aa11.66□□□□□ -0.54
SNHG4-208ENST00000514110 LHPPQ9H008 270 aa11.66□□□□□ -0.54
SNHG4-208ENST00000514110 ZNF304Q9HCX3 659 aa11.66□□□□□ -0.54
SNHG4-208ENST00000514110 SEMA3GQ9NS98 782 aa11.66□□□□□ -0.54
SNHG4-208ENST00000514110 IL1RAPL1Q9NZN1 696 aa11.66□□□□□ -0.54
SNHG4-208ENST00000514110 NXT1Q9UKK6 140 aaKnown RBP11.66□□□□□ -0.54
SNHG4-208ENST00000514110 NOVA2Q9UNW9 492 aaKnown RBP11.66□□□□□ -0.54
SNHG4-208ENST00000514110 SLC5A6Q9Y289 635 aa11.66□□□□□ -0.54
SNHG4-208ENST00000514110 FAM169AQ9Y6X4 670 aa11.66□□□□□ -0.54
SNHG4-208ENST00000514110 DOCK10Q96BY6 2186 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 OR2A25A4D2G3 310 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 ZGLP1P0C6A0 271 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 ERGP11308 486 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 TERF1P54274 439 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 KLC1Q07866 573 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.65□□□□□ -0.54
SNHG4-208ENST00000514110 ZNF787Q6DD87 383 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 MRNIPQ6NTE8 343 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 FBXO42Q6P3S6 717 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 LRRC8BQ6P9F7 803 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 SUSD1Q6UWL2 747 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 C4orf22Q6V702 233 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 GSTA5Q7RTV2 222 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 SDCCAG8Q86SQ7 713 aaPredicted RBP11.65□□□□□ -0.54
SNHG4-208ENST00000514110 KCNMB4Q86W47 210 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 PRSS58Q8IYP2 241 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 STT3BQ8TCJ2 826 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 MAGEC3Q8TD91 643 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 MIEF2Q96C03 454 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 C8orf44Q96CB5 159 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 THOC3Q96J01 351 aaKnown RBP11.65□□□□□ -0.54
SNHG4-208ENST00000514110 CNDP1Q96KN2 507 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 DPH7Q9BTV6 452 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 CRB3Q9BUF7 120 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 SYNPO2LQ9H987 977 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 SPATA7Q9P0W8 599 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 SOX13Q9UN79 622 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 CRYL1Q9Y2S2 319 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 MRFAP1Q9Y605 127 aa11.65□□□□□ -0.54
SNHG4-208ENST00000514110 IGKV1-8A0A0C4DH67 115 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ARHGEF33A8MVX0 844 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 H0YGG7 62 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 AP3B1O00203 1094 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 AVILO75366 819 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 KLHL18O94889 574 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 FGGP02679 453 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 F7P08709 466 aaPredicted RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ACPPP15309 386 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 TPSB2P20231 275 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ATP5DP30049 168 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 CMPK1P30085 196 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 TSFMP43897 325 aaKnown RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ARF3P61204 181 aaPredicted RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 OCA2Q04671 838 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ELOAQ14241 798 aaKnown RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF169Q14929 603 aaPredicted RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 TPSAB1Q15661 275 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 PRTGQ2VWP7 1150 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ACSBG2Q5FVE4 666 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 VWA2Q5GFL6 755 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 RNF187Q5TA31 235 aaPredicted RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 IRAK1BP1Q5VVH5 260 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ATG9BQ674R7 924 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 LINC00696Q6ZRV3 163 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 CENPUQ71F23 418 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 LAPTM4BQ86VI4 370 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ST6GALNAC3Q8NDV1 305 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 OR9A1PQ8NGU1 263 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 GRHL3Q8TE85 626 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 C5orf34Q96MH7 638 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 TCF12Q99081 682 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ZFYVE21Q9BQ24 234 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 TRIM56Q9BRZ2 755 aaKnown RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF160Q9HCG1 818 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 AGPAT4Q9NRZ5 378 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ZNF282Q9UDV7 671 aaPredicted RBP11.64□□□□□ -0.55
SNHG4-208ENST00000514110 ZKSCAN5Q9Y2L8 839 aa11.64□□□□□ -0.55
SNHG4-208ENST00000514110 CELSR2Q9HCU4 2923 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 IGLV3-12A0A075B6K2 115 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 H3BMM5 538 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 MYO1CO00159 1063 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 E2F3O00716 465 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 FFAR3O14843 346 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 GPR42O15529 346 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 PSIP1O75475 530 aaKnown RBP11.63□□□□□ -0.55
SNHG4-208ENST00000514110 HPP00738 406 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 ESR1P03372 595 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 ERVK-10P10266 1014 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 CHRM3P20309 590 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 FBLP22087 321 aaKnown RBP11.63□□□□□ -0.55
SNHG4-208ENST00000514110 DCTP40126 519 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 CARSP49589 748 aaKnown RBP11.63□□□□□ -0.55
SNHG4-208ENST00000514110 CDK16Q00536 496 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 CDC16Q13042 620 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 MFAP5Q13361 173 aa11.63□□□□□ -0.55
SNHG4-208ENST00000514110 KCNJ11Q14654 390 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms