RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 DCUN1D3Q8IWE4 304 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 OR8K1Q8NGG5 319 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 LKAAEAR1Q8TD35 194 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 C10orf90Q96M02 699 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 SPATA13Q96N96 652 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 ALS2CR12Q96Q35 445 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 SPOCK3Q9BQ16 436 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 FERMT1Q9BQL6 677 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 RNF32Q9H0A6 362 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 RIC8BQ9NVN3 520 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 FAM169AQ9Y6X4 670 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 CPAMD8Q8IZJ3 1885 aa19.32■□□□□ 0.68
SQSTM1-215ENST00000514093 CACNA1CQ13936 2221 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 CCDC162PA2VCL2 907 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 KRT87PA6NCN2 255 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 IQCF5A8MTL0 148 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 A8MUI8 341 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 TARM1B6A8C7 271 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 GOLGA6L22H0YM25 854 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 RASGRF2O14827 1237 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 STK10O94804 968 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 NADKO95544 446 aaPredicted RBP19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 HEXBP07686 556 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 RBP3P10745 1247 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 FOXN2P32314 431 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 EIF3EP60228 445 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 YBX1P67809 324 aaKnown RBP19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 CSNK1G2P78368 415 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 PCOLCEQ15113 449 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 ZNF766Q5HY98 468 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 RIPOR1Q6ZS17 1223 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 SPPL2CQ8IUH8 684 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 CDKL3Q8IVW4 592 aaPredicted RBP19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 KRT35Q92764 455 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 CABS1Q96KC9 395 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 CCDC42Q96M95 316 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 DNAJC7Q99615 494 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 NHEJ1Q9H9Q4 299 aaPredicted RBP19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 ZNF835Q9Y2P0 537 aa19.31■□□□□ 0.68
SQSTM1-215ENST00000514093 A0A1W2PQ72 361 aa19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 RPN2P04844 631 aa19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 MYBL2P10244 700 aa19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 MUM1Q2TAK8 710 aa19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 CCSMST1Q4G0I0 132 aa19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 CCDC38Q502W7 563 aa19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 MEX3BQ6ZN04 569 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 HES7Q9BYE0 225 aa19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 GPAMQ9HCL2 828 aa19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 ZNHIT6Q9NWK9 470 aaKnown RBP19.3■□□□□ 0.68
SQSTM1-215ENST00000514093 GPC4O75487 556 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 ERVK-10P10266 1014 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 CTNNA2P26232 953 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 EFNA3P52797 238 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 TCEAL1Q15170 157 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 SYT16Q17RD7 645 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 KCTD11Q693B1 232 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 FCRLBQ6BAA4 426 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 FBXO42Q6P3S6 717 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 C3P1Q6ZMU1 363 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 GPR137Q96N19 417 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 ENKD1Q9H0I2 346 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 ZNF700Q9H0M5 742 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 KLHL1Q9NR64 748 aa19.29■□□□□ 0.68
SQSTM1-215ENST00000514093 IGHV3-20A0A0C4DH32 117 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 NPIPA5E9PKD4 350 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 BDKRB1P46663 353 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 LONRF1Q17RB8 773 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 CAVIN1Q6NZI2 390 aaKnown RBP19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 UNC5DQ6UXZ4 953 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 Q6ZPB1 254 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 RNF44Q7L0R7 432 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 KRT222Q8N1A0 295 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 TAB3Q8N5C8 712 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 OR2L3Q8NG85 312 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 THAP3Q8WTV1 239 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 ASZ1Q8WWH4 475 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 LRRC45Q96CN5 670 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 MMABQ96EY8 250 aaPredicted RBP19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 IMMP1LQ96LU5 166 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 SYNPO2LQ9H987 977 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 ANKRD10Q9NXR5 420 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 NPIPA1Q9UND3 350 aa19.28■□□□□ 0.68
SQSTM1-215ENST00000514093 NAV3Q8IVL0 2385 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 LOC102723996A0A087X1L8 192 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 MROH6A6NGR9 719 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 H0YGG7 62 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 METTL18O95568 372 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 ART1P52961 327 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 ARF3P61204 181 aaPredicted RBP19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 ALDH6A1Q02252 535 aaKnown RBP19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 DSG2Q14126 1118 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 PRTGQ2VWP7 1150 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 KLHDC8BQ8IXV7 354 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 BEST3Q8N1M1 668 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 AMER3Q8N944 861 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 AGAP11Q8TF27 550 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 HDAC10Q969S8 669 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 SIGLEC12Q96PQ1 595 aa19.27■□□□□ 0.68
SQSTM1-215ENST00000514093 PPP1R2P1Q96PQ5 205 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms