RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 C1QTNF7Q9BXJ2 289 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 SLC17A9Q9BYT1 436 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 TRIM8Q9BZR9 551 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 TRIM15Q9C019 465 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 EHD1Q9H4M9 534 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 SGK2Q9HBY8 427 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 TM7SF3Q9NS93 570 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 ACTR3BQ9P1U1 418 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 VPS29Q9UBQ0 182 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 FZD4Q9ULV1 537 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 DYRK1BQ9Y463 629 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 AQP12BA6NM10 295 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 C2CD4DB7Z1M9 353 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 KCNH1O95259 989 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 ERGP11308 486 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 IGFALSP35858 605 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 LIPEQ05469 1076 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 GRSF1Q12849 480 aaKnown RBP eCLIP14.45□□□□□ -0.1
VCAN-211ENST00000513984 MAPKAPK3Q16644 382 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 C10orf62Q5T681 223 aaPredicted RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 LPCAT4Q643R3 524 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 ATG9BQ674R7 924 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 NOXRED1Q6NXP6 359 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 CYP2R1Q6VVX0 501 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 TMPRSS11BQ86T26 416 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 AQP12AQ8IXF9 295 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 LILRA2Q8N149 483 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 GOLM1Q8NBJ4 401 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 OR7G3Q8NG95 312 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 OR8J3Q8NGG0 315 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 OR5AR1Q8NGP9 310 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 CLHC1Q8NHS4 586 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 TFGQ92734 400 aaPredicted RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 TESCQ96BS2 214 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 C11orf24Q96F05 449 aaPredicted RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 APOLD1Q96LR9 279 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 LRGUKQ96M69 825 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 TMEM74Q96NL1 305 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 UHRF1Q96T88 793 aaPredicted RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 EFCAB11Q9BUY7 163 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 KLHL4Q9C0H6 718 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 CCDC177Q9NQR7 707 aaPredicted RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 LRCH1Q9Y2L9 728 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 HEATR5BQ9P2D3 2071 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 RPN2P04844 631 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 TACR1P25103 407 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 SLC7A1P30825 629 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 MED27Q6P2C8 311 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 USP30Q70CQ3 517 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 RIMKLAQ8IXN7 391 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 OR5K2Q8NHB8 316 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 DNAJB8Q8NHS0 232 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 SETD7Q8WTS6 366 aaKnown RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 ASB12Q8WXK4 309 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 REPS1Q96D71 796 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 MTERF1Q99551 399 aaKnown RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 KCTD14Q9BQ13 255 aaPredicted RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 TIMM29Q9BSF4 260 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 OSBPL6Q9BZF3 934 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 RMI1Q9H9A7 625 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 COPS7BQ9H9Q2 264 aaPredicted RBP14.45□□□□□ -0.1
VCAN-211ENST00000513984 ACSL5Q9ULC5 683 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 SH2B3Q9UQQ2 575 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 AP4S1Q9Y587 144 aa14.45□□□□□ -0.1
VCAN-211ENST00000513984 PRR23AA6NEV1 266 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 ARPC2O15144 300 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 PI15O43692 258 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 CAPNS1P04632 268 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 C1GALT1C1LP0DN25 315 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 HTR1EP28566 365 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 GRIA3P42263 894 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 DDX39BQ13838 428 aaKnown RBP14.44□□□□□ -0.1
VCAN-211ENST00000513984 ARHGAP19Q14CB8 494 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 LCTLQ6UWM7 567 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 PDSS2Q86YH6 399 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 LAS2Q8IYD9 372 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 HUS1BQ8NHY5 278 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 SLC5A11Q8WWX8 675 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 SLCO4A1Q96BD0 722 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 SIPA1Q96FS4 1042 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 PPM1MQ96MI6 270 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 TSSK3Q96PN8 268 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 TTYH1Q9H313 450 aaPredicted RBP14.44□□□□□ -0.1
VCAN-211ENST00000513984 PRO3102Q9H379 93 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 KCNK12Q9HB15 430 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 EGFL7Q9UHF1 273 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 RUVBL1Q9Y265 456 aaKnown RBP14.44□□□□□ -0.1
VCAN-211ENST00000513984 SLC17A4Q9Y2C5 497 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 MAN2B2Q9Y2E5 1009 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 SNX13Q9Y5W8 968 aa14.44□□□□□ -0.1
VCAN-211ENST00000513984 SPTBN5Q9NRC6 3674 aaKnown RBP14.44□□□□□ -0.1
VCAN-211ENST00000513984 MAGEB17A8MXT2 336 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PRMT3O60678 531 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 FUCA1P04066 466 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 CEACAM5P06731 702 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 C21orf58P58505 322 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 PAGE2BQ5JRK9 111 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 CATSPEREQ5SY80 951 aa14.43□□□□□ -0.1
VCAN-211ENST00000513984 CAPRIN2Q6IMN6 1127 aaKnown RBP14.43□□□□□ -0.1
VCAN-211ENST00000513984 MSANTD1Q6ZTZ1 278 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms