RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ZNF37AP17032 561 aaPredicted RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 ECHS1P30084 290 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 MAGEA4P43358 317 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 RGS4P49798 205 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 EMP3P54852 163 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 TAS2R39P59534 338 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 IL2P60568 153 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 ABATP80404 500 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 SLC7A5Q01650 507 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 MC1RQ01726 317 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 CDC20Q12834 499 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 ZKSCAN8Q15776 578 aaPredicted RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 PRTGQ2VWP7 1150 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 DEFB110Q30KQ9 67 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 GLE1Q53GS7 698 aaKnown RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 ZC3H12BQ5HYM0 836 aaKnown RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 YOD1Q5VVQ6 348 aaPredicted RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 ICE2Q659A1 982 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 MRPL14Q6P1L8 145 aaKnown RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 SUSD1Q6UWL2 747 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 SBSNQ6UWP8 590 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 UBE2R2Q712K3 238 aaPredicted RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 STRA8Q7Z7C7 330 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 TAX1BP1Q86VP1 789 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 CEP97Q8IW35 865 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 SYTL1Q8IYJ3 562 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 RAB42Q8N4Z0 105 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 PROKR1Q8TCW9 393 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 ANKRD49Q8WVL7 239 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 LINGO1Q96FE5 620 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 CCDC138Q96M89 665 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 CATSPER2Q96P56 530 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 OR2A5Q96R48 311 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 MIPEPQ99797 713 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 FAM129AQ9BZQ8 928 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 SEMA4CQ9C0C4 833 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 POPDC3Q9HBV1 291 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 PPANQ9NQ55 473 aaKnown RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 NSMCE4AQ9NXX6 385 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 STOX2Q9P2F5 926 aaPredicted RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 FARSAQ9Y285 508 aaKnown RBP9.31□□□□□ -0.92
RNF4-221ENST00000513643 HEATR5BQ9P2D3 2071 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 PCM1Q15154 2024 aa9.31□□□□□ -0.92
RNF4-221ENST00000513643 SPENQ96T58 3664 aaKnown RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 KCNE1BA0A087WTH5 132 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 LOC105369274A0A096LPK9 316 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 LOC102723532A0A0G2JNH3 316 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 ESYT3A0FGR9 886 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 ZNF839A8K0R7 811 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 CNOT3O75175 753 aaKnown RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 MED26O95402 600 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 KLK3P07288 261 aaPredicted RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 ENO2P09104 434 aaPredicted RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 NPPBP16860 134 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 CYP2A7P20853 494 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 AP1S2P56377 157 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 POU4F1Q01851 419 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 NAA25Q14CX7 972 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 UGT8Q16880 541 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 TCTE1Q5JU00 501 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 ATP1A1-AS1Q5TC04 95 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 FRMPD2BQ6IN97 320 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 C8orf74Q6P047 294 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 SYVN1Q86TM6 617 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 PALM2Q8IXS6 379 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 OR4N4Q8N0Y3 316 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 GPATCH11Q8N954 259 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 OR56A3Q8NH54 315 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 MCOLN3Q8TDD5 553 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 EXTL1Q92935 676 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 MED8Q96G25 268 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 VPS39Q96JC1 886 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 UBXN10Q96LJ8 280 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 GPR22Q99680 433 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 CPNE1Q99829 537 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 DPH7Q9BTV6 452 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 SARGQ9BW04 601 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 ACTL8Q9H568 366 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 GEMIN8Q9NWZ8 242 aaKnown RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 TSR3Q9UJK0 312 aaKnown RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 TUBD1Q9UJT1 453 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 SRPK3Q9UPE1 567 aa9.3□□□□□ -0.92
RNF4-221ENST00000513643 MTO1Q9Y2Z2 717 aaKnown RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 PRRC2CQ9Y520 2896 aaKnown RBP9.3□□□□□ -0.92
RNF4-221ENST00000513643 GCN1Q92616 2671 aaKnown RBP9.29□□□□□ -0.92
RNF4-221ENST00000513643 ANKRD12Q6UB98 2062 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 FAM95CA0A1B0GW59 222 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 HMX2A2RU54 273 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 HRH2P25021 359 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 CMPK1P30085 196 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 GP5P40197 560 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 ARSFP54793 590 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 DCDP81605 110 aaKnown RBP9.29□□□□□ -0.92
RNF4-221ENST00000513643 CDKL1Q00532 357 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 NFKB2Q00653 900 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 PDAP1Q13442 181 aaKnown RBP9.29□□□□□ -0.92
RNF4-221ENST00000513643 IL10RAQ13651 578 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 NCF4Q15080 339 aa9.29□□□□□ -0.92
RNF4-221ENST00000513643 PTCHD3Q3KNS1 767 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms