RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ADGRD1Q6QNK2 874 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.29
SPCS3-204ENST00000513139 SIRT6Q8N6T7 355 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 THAP3Q8WTV1 239 aaPredicted RBP13.27□□□□□ -0.29
SPCS3-204ENST00000513139 C8orf44Q96CB5 159 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 QKIQ96PU8 341 aaKnown RBP eCLIP13.27□□□□□ -0.292e-7■■■■□ 23.1
SPCS3-204ENST00000513139 SELENOSQ9BQE4 189 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 GORASP1Q9BQQ3 440 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 PACSIN2Q9UNF0 486 aaPredicted RBP13.27□□□□□ -0.29
SPCS3-204ENST00000513139 AAR2Q9Y312 384 aaKnown RBP13.27□□□□□ -0.29
SPCS3-204ENST00000513139 PCDHGB6Q9Y5F9 930 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 ABCA4P78363 2273 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 SLC5A10A0PJK1 596 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 OR5H15A6NDH6 313 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
SPCS3-204ENST00000513139 ZSCAN12O43309 604 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 WFS1O76024 890 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 ZRANB2O95218 330 aaKnown RBP eCLIP13.26□□□□□ -0.29
SPCS3-204ENST00000513139 MLYCDO95822 493 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 S1PR4O95977 384 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 FTH1P02794 183 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 CXCR2P25025 360 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 PKLRP30613 574 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 CDKN1CP49918 316 aaPredicted RBP13.26□□□□□ -0.29
SPCS3-204ENST00000513139 CDSNQ15517 529 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 KRTCAP3Q53RY4 240 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 ITPRIPL1Q6GPH6 555 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 CNSTQ6PJW8 725 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 FIGLAQ6QHK4 219 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 PEX26Q7Z412 305 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 LINC01555Q8NAE3 123 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 ELMO1Q92556 727 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 ZUFSPQ96AP4 578 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 MAGED4Q96JG8 741 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 TMUB1Q9BVT8 246 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 ARNT2Q9HBZ2 717 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 RIC8BQ9NVN3 520 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
SPCS3-204ENST00000513139 TINAGQ9UJW2 476 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 AMFRQ9UKV5 643 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 PLAGL1Q9UM63 463 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 KLHL20Q9Y2M5 609 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 MEMO1Q9Y316 297 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 MAU2Q9Y6X3 613 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 FBN3Q75N90 2809 aa13.26□□□□□ -0.29
SPCS3-204ENST00000513139 IGHV1-45A0A0A0MS14 117 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 HYKKA2RU49 373 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 FAM221AA4D161 298 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 TARM1B6A8C7 271 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 UQCRHP07919 91 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 ICAM2P13598 275 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 HOXB4P17483 251 aaPredicted RBP13.25□□□□□ -0.29
SPCS3-204ENST00000513139 CD9P21926 228 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 GRIA3P42263 894 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 LONRF1Q17RB8 773 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 DNAJC21Q5F1R6 531 aaKnown RBP13.25□□□□□ -0.29
SPCS3-204ENST00000513139 ABHD17BQ5VST6 288 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 HIBCHQ6NVY1 386 aaPredicted RBP13.25□□□□□ -0.29
SPCS3-204ENST00000513139 TAS2R42Q7RTR8 314 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 SPPL2CQ8IUH8 684 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 METTL27Q8N6F8 245 aaPredicted RBP13.25□□□□□ -0.29
SPCS3-204ENST00000513139 APOL2Q9BQE5 337 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 MENTQ9BUN1 341 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.25□□□□□ -0.29
SPCS3-204ENST00000513139 NEU2Q9Y3R4 380 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 PCDHA3Q9Y5H8 950 aa13.25□□□□□ -0.29
SPCS3-204ENST00000513139 PRRC2AP48634 2157 aaKnown RBP13.24□□□□□ -0.29
SPCS3-204ENST00000513139 IDSB3KWA1 339 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 PSTPIP1O43586 416 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 F10P00742 488 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 RPN2P04844 631 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
SPCS3-204ENST00000513139 EMP2P54851 167 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 CSNK1G2P78368 415 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 ITIH4Q14624 930 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 BRD3Q15059 726 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 SF1Q15637 639 aaKnown RBP13.24□□□□□ -0.29
SPCS3-204ENST00000513139 DBN1Q16643 649 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 TFDP3Q5H9I0 405 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 WASHC2DQ5SRD0 308 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 PACS1Q6VY07 963 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 MEX3BQ6ZN04 569 aaKnown RBP13.24□□□□□ -0.29
SPCS3-204ENST00000513139 PIANPQ8IYJ0 282 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 SYCE1Q8N0S2 351 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 OR2L8Q8NGY9 312 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 PHF10Q8WUB8 498 aaKnown RBP13.24□□□□□ -0.29
SPCS3-204ENST00000513139 ALG3Q92685 438 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 DNAJC1Q96KC8 554 aaKnown RBP13.24□□□□□ -0.29
SPCS3-204ENST00000513139 GPR137Q96N19 417 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 FERMT1Q9BQL6 677 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 NLE1Q9NVX2 485 aaPredicted RBP13.24□□□□□ -0.29
SPCS3-204ENST00000513139 SMARCAL1Q9NZC9 954 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 TEKT2Q9UIF3 430 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 KLK4Q9Y5K2 254 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 AKAP6Q13023 2319 aa13.24□□□□□ -0.29
SPCS3-204ENST00000513139 LOC102723996A0A087X1L8 192 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 CCL22O00626 93 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 CTSVO60911 334 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 FAM155BO75949 473 aa13.23□□□□□ -0.29
SPCS3-204ENST00000513139 WISP2O76076 250 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms