RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 STT3BQ8TCJ2 826 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 RELTQ969Z4 430 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 THOC3Q96J01 351 aaKnown RBP12.01□□□□□ -0.49
VEGFA-216ENST00000512683 TCF12Q99081 682 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 SLX1AQ9BQ83 275 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 CRB3Q9BUF7 120 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 CATSPERZQ9NTU4 200 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 GNPTGQ9UJJ9 305 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 ZKSCAN5Q9Y2L8 839 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 TNRC6AQ8NDV7 1962 aaKnown RBP12.01□□□□□ -0.49
VEGFA-216ENST00000512683 TRAV17A0A0B4J275 112 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 DYTNA2CJ06 578 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 ZNF839A8K0R7 811 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 CD3EAPO15446 510 aaKnown RBP12□□□□□ -0.49
VEGFA-216ENST00000512683 SERPINA7P05543 415 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 ZGLP1P0C6A0 271 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 ACPPP15309 386 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 CXCR2P25025 360 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 COL8A1P27658 744 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 ATP5DP30049 168 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 CXCR5P32302 372 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 OR1D4P47884 311 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 ADARP55265 1226 aaKnown RBP12□□□□□ -0.49
VEGFA-216ENST00000512683 VSX2P58304 361 aaPredicted RBP12□□□□□ -0.49
VEGFA-216ENST00000512683 CRADDP78560 199 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 ARHGAP19Q14CB8 494 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 FAM180AQ6UWF9 173 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 SDCCAG8Q86SQ7 713 aaPredicted RBP12□□□□□ -0.49
VEGFA-216ENST00000512683 TRIM58Q8NG06 486 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 OR2L3Q8NG85 312 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 TGIF2Q9GZN2 237 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 IL22Q9GZX6 179 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 P2RY12Q9H244 342 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
VEGFA-216ENST00000512683 CHRAC1Q9NRG0 131 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 TREX1Q9NSU2 369 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 C14orf105Q9NVL8 296 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 MARCH4Q9P2E8 410 aaPredicted RBP12□□□□□ -0.49
VEGFA-216ENST00000512683 TTC7AQ9ULT0 858 aaPredicted RBP12□□□□□ -0.49
VEGFA-216ENST00000512683 OSGIN2Q9Y236 505 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 KLHL20Q9Y2M5 609 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
VEGFA-216ENST00000512683 OR2A25A4D2G3 310 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 E2F3O00716 465 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 MAP2K7O14733 419 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 CTSVO60911 334 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 VPS26AO75436 327 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 NDUFS3O75489 264 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 BMP10O95393 424 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 CYC1P08574 325 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 PKMP14618 531 aaKnown RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 CMPK1P30085 196 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 CSE1LP55060 971 aaKnown RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 SESN2P58004 480 aaPredicted RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 CDK16Q00536 496 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 KLC1Q07866 573 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 ART3Q13508 389 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 PRTGQ2VWP7 1150 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 RNF187Q5TA31 235 aaPredicted RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 C1QL3Q5VWW1 255 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 ZNF324BQ6AW86 544 aaPredicted RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 MRNIPQ6NTE8 343 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 FBXO42Q6P3S6 717 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 MTFR2Q6P444 385 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 RNF44Q7L0R7 432 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 LDB1Q86U70 411 aaPredicted RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 FAM20CQ8IXL6 584 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 PRELID2Q8N945 189 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 OR2A1Q8NGT9 310 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 DNAJB8Q8NHS0 232 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 MOCOSQ96EN8 888 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 IL17FQ96PD4 163 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 ZFYVE21Q9BQ24 234 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 RNF32Q9H0A6 362 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 SOX17Q9H6I2 414 aaPredicted RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 OLAHQ9NV23 265 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 BFARQ9NZS9 450 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 KLHL42Q9P2K6 505 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 CTSFQ9UBX1 484 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 ZC3H7BQ9UGR2 993 aaKnown RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 C3orf18Q9UK00 162 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 MRPS2Q9Y399 296 aaKnown RBP11.99□□□□□ -0.49
VEGFA-216ENST00000512683 ANKRD12Q6UB98 2062 aa11.99□□□□□ -0.49
VEGFA-216ENST00000512683 ABCA12Q86UK0 2595 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 NSG1A0A0A6YYJ2 146 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 TCRBV7S3A2A0A539 114 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 IQCF5A8MTL0 148 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 CDK2AP1O14519 115 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 CEP104O60308 925 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 JRKO75564 520 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 MATN4O95460 622 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 ESR1P03372 595 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 ERVK-10P10266 1014 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 ERGP11308 486 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 MCM3P25205 808 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 NMBRP28336 390 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 SOX11P35716 441 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 EMP2P54851 167 aa11.98□□□□□ -0.49
VEGFA-216ENST00000512683 ARG2P78540 354 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms