RNA–Protein interactions for RNA: ENST00000511754.5

TNPO1-208, Transcript of transportin 1, human

TSL 5

Gene TNPO1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNPO1-208	ENST00000511754	PTPN3	P26045	913 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	MAPK4	P31152	587 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	PSMB10	P40306	273 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	HADHA	P40939	763 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	LMAN1	P49257	510 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	IRF3	Q14653	427 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	PTPN14	Q15678	1187 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	UGT3A2	Q3SY77	523 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	EIPR1	Q53HC9	387 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	IGSF11	Q5DX21	431 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	RAB41	Q5JT25	222 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	RNASEH2B	Q5TBB1	312 aa	Known RBP	2.55	□□□□□ -2
TNPO1-208	ENST00000511754	FAAH2	Q6GMR7	532 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	TEX38	Q6PEX7	206 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	LEKR1	Q6ZMV7	388 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	ARHGAP22	Q7Z5H3	698 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	ZBED8	Q8IZ13	594 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754		Q8N7P7	452 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	SUMF1	Q8NBK3	374 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	OR7A2P	Q8NGA2	310 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	HDAC2	Q92769	488 aa	Known RBP	2.55	□□□□□ -2
TNPO1-208	ENST00000511754	SLAMF9	Q96A28	289 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	CNRIP1	Q96F85	164 aa	Predicted RBP	2.55	□□□□□ -2
TNPO1-208	ENST00000511754	CALML4	Q96GE6	196 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	C4orf45	Q96LM5	186 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	C1orf147	Q96MC9	270 aa	Predicted RBP	2.55	□□□□□ -2
TNPO1-208	ENST00000511754	FAM20A	Q96MK3	541 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	MAP3K3	Q99759	626 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	OVOL2	Q9BRP0	275 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	OPA3	Q9H6K4	179 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	WSB2	Q9NYS7	404 aa	Predicted RBP	2.55	□□□□□ -2
TNPO1-208	ENST00000511754	SUCLA2	Q9P2R7	463 aa	Predicted RBP	2.55	□□□□□ -2
TNPO1-208	ENST00000511754	CLIP2	Q9UDT6	1046 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	ZNF107	Q9UII5	783 aa	Predicted RBP	2.55	□□□□□ -2
TNPO1-208	ENST00000511754	LNPEP	Q9UIQ6	1025 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	SELENOK	Q9Y6D0	94 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754		R4GN57	208 aa		2.55	□□□□□ -2
TNPO1-208	ENST00000511754	HCFC1	P51610	2035 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754		A0A087WUV0	522 aa	Predicted RBP	2.54	□□□□□ -2
TNPO1-208	ENST00000511754	OR2A25	A4D2G3	310 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	SHISA9	B4DS77	424 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	VILL	O15195	856 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	GALR3	O60755	368 aa	Predicted RBP	2.54	□□□□□ -2
TNPO1-208	ENST00000511754	KRT33A	O76009	404 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	SOX3	P41225	446 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	DNA2	P51530	1060 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	ALDH3A2	P51648	485 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	IRX4	P78413	519 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	MAT1A	Q00266	395 aa	Known RBP	2.54	□□□□□ -2
TNPO1-208	ENST00000511754	DHODH	Q02127	395 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	FAM189A2	Q15884	450 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	FAM182A	Q5T1J6	154 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	FAM166A	Q6J272	317 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	TMPRSS11B	Q86T26	416 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	PHC2	Q8IXK0	858 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	SLC34A3	Q8N130	599 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	NDUFAF2	Q8N183	169 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	FGFRL1	Q8N441	504 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	THAP8	Q8NA92	274 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	SYN2	Q92777	582 aa	Predicted RBP	2.54	□□□□□ -2
TNPO1-208	ENST00000511754	ZNF597	Q96LX8	424 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	PAFAH2	Q99487	392 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	SEPHS2	Q99611	448 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	OLFM1	Q99784	485 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	ATF6B	Q99941	703 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	SYNC	Q9H7C4	482 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	PADI2	Q9Y2J8	665 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	TMED3	Q9Y3Q3	217 aa		2.54	□□□□□ -2
TNPO1-208	ENST00000511754	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	2.53	□□□□□ -2
TNPO1-208	ENST00000511754	TRIM49B	A6NDI0	452 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	TMEM221	A6NGB7	291 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754		O00370	1275 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	EPB41L2	O43491	1005 aa	Known RBP	2.53	□□□□□ -2
TNPO1-208	ENST00000511754	HAPLN1	P10915	354 aa	Predicted RBP	2.53	□□□□□ -2
TNPO1-208	ENST00000511754	BCL3	P20749	454 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	TNFAIP3	P21580	790 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	ETV5	P41161	510 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	CLCN4	P51793	760 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	ZNF75D	P51815	510 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	TRA2B	P62995	288 aa	Known RBP	2.53	□□□□□ -2
TNPO1-208	ENST00000511754	ZNF177	Q13360	481 aa	Predicted RBP	2.53	□□□□□ -2
TNPO1-208	ENST00000511754	TMEM132D	Q14C87	1099 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	C15orf59	Q2T9L4	293 aa	Predicted RBP	2.53	□□□□□ -2
TNPO1-208	ENST00000511754	HSP90AB4P	Q58FF6	505 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	PLEKHS1	Q5SXH7	462 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	CCDC70	Q6NSX1	233 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	FAM198B	Q6UWH4	519 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	OR4N5	Q8IXE1	308 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	MMD2	Q8IY49	270 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	TYMSOS	Q8TAI1	123 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	PTPMT1	Q8WUK0	201 aa	Predicted RBP	2.53	□□□□□ -2
TNPO1-208	ENST00000511754	PIGB	Q92521	554 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	RFT1	Q96AA3	541 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	SPDL1	Q96EA4	605 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	CNOT6L	Q96LI5	555 aa	Known RBP	2.53	□□□□□ -2
TNPO1-208	ENST00000511754	ZMYND12	Q9H0C1	365 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	PARL	Q9H300	379 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	TLE6	Q9H808	572 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754		Q9N2K0	584 aa		2.53	□□□□□ -2
TNPO1-208	ENST00000511754	EQTN	Q9NQ60	294 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms