RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ARF5P84085 180 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 MAMLD1Q13495 774 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SEMA3AQ14563 771 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLC10A1Q14973 349 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SGCBQ16585 318 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 GAB4Q2WGN9 574 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PLA2G4EQ3MJ16 856 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 FSCBQ5H9T9 825 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 NEPROQ6NW34 567 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 KLHL17Q6TDP4 642 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 RTL4Q6ZR62 310 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 MILR1Q7Z6M3 343 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 MRGPREQ86SM8 312 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TBC1D1Q86TI0 1168 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 MYLK4Q86YV6 388 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLC15A4Q8N697 577 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TC2NQ8N9U0 490 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PLA2G15Q8NCC3 412 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TSEN2Q8NCE0 465 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 OR9A1PQ8NGU1 263 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 OR14A16Q8NHC5 309 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CENPIQ92674 756 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TMCO6Q96DC7 493 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CFAP36Q96G28 342 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLC41A2Q96JW4 573 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 NUDT22Q9BRQ3 303 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 EFCAB11Q9BUY7 163 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 OSBPL8Q9BZF1 889 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 RAB17Q9H0T7 212 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 HAUS4Q9H6D7 363 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CAAP1Q9H8G2 361 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ABCF3Q9NUQ8 709 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SMOXQ9NWM0 555 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 OSER1Q9NX31 292 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 LYARQ9NX58 379 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 EURLQ9NYK6 297 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PDP2Q9P2J9 529 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 IMPACTQ9P2X3 320 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLC24A2Q9UI40 661 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 POMT2Q9UKY4 750 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ZFR2Q9UPR6 939 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ITM2BQ9Y287 266 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PPIL1Q9Y3C6 166 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 MAP4K5Q9Y4K4 846 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SPEF1Q9Y4P9 236 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PCDHGB6Q9Y5F9 930 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CHD8Q9HCK8 2581 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 HMGB1P1B2RPK0 211 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 E9PLN8 166 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TERTO14746 1132 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ZNF749O43361 778 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SMAD6O43541 496 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 HCRTO43612 131 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 NOBOXO60393 691 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 BUB1BO60566 1050 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ZMPSTE24O75844 475 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CEACAM5P06731 702 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 NR2C1P13056 603 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ATP6V1C1P21283 382 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 KDELR1P24390 212 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 AK4P27144 223 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PBX1P40424 430 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ZFP36L2P47974 494 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 EIF3BP55884 814 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ARL4CP56559 192 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 RELAQ04206 551 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 FAM53BQ14153 422 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 EFR3AQ14156 821 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLC1A5Q15758 541 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 KLHL26Q53HC5 615 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 KIAA0408Q6ZU52 694 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ARHGAP22Q7Z5H3 698 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ASPGQ86U10 573 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SERPINA9Q86WD7 417 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 OR4K17Q8NGC6 315 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 OR2L8Q8NGY9 312 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PPP1R14CQ8TAE6 165 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 NR4A3Q92570 626 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 WBP2Q969T9 261 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 MUCL1Q96DR8 90 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ZNF597Q96LX8 424 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 DGAT2Q96PD7 388 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PSMB7Q99436 277 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CTRCQ99895 268 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 VKORC1Q9BQB6 163 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 NPLQ9BXD5 320 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 GBA3Q9H227 469 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PIGMQ9H3S5 423 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PIF1Q9H611 641 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 COG4Q9H9E3 785 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 RRAGDQ9NQL2 400 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PRTFDC1Q9NRG1 225 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TMEM59LQ9UK28 342 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 YARS2Q9Y2Z4 477 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PCDHA3Q9Y5H8 950 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 KCNMB2Q9Y691 235 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 COL6A6A6NMZ7 2263 aa2.73□□□□□ -1.97
CLOCK-209ENST00000511124 CACNA1EQ15878 2313 aa2.73□□□□□ -1.97
CLOCK-209ENST00000511124 CREBBPQ92793 2442 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms