RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 LKAAEAR1Q8TD35 194 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 PTCD2Q8WV60 388 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 TSACCQ96A04 125 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 ECHDC3Q96DC8 303 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 LINGO1Q96FE5 620 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 LRIG1Q96JA1 1093 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 SLC30A3Q99726 388 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 LGR4Q9BXB1 951 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 RAD21L1Q9H4I0 556 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 ZC4H2Q9NQZ6 224 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 TM7SF3Q9NS93 570 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 H3BMQ9 156 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CYP7B1O75881 506 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 RASGRP1O95267 797 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 GLULP15104 373 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CPOXP36551 454 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CTSCP53634 463 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 RPL26P61254 145 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CSTF1Q05048 431 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 DMWDQ09019 674 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 WSCD2Q2TBF2 565 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CCDC157Q569K6 752 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 MICU2Q8IYU8 434 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 RBFAQ8N0V3 343 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 LPGAT1Q92604 370 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 NRBF2Q96F24 287 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 COG8Q96MW5 612 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 SLC7A5P2Q9GIP4 190 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 WDR26Q9H7D7 661 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 TBCCD1Q9NVR7 557 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 TMEM216Q9P0N5 145 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 RAB26Q9ULW5 256 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 UGT2A1Q9Y4X1 527 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 NPEPPSL1A6NEC2 478 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CHURC1-FNTBB4DL54 471 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 H3BNX3 289 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 GNGT2O14610 69 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 ATF4P18848 351 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 TFEBP19484 476 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 PSMB9P28065 219 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 ELK4P28324 431 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 GNPDA1P46926 289 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 FNTBP49356 437 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 RAB10P61026 200 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 TMEM115Q12893 351 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 IRF4Q15306 451 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CEP68Q76N32 757 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 DPPA4Q7L190 304 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 SPPL2CQ8IUH8 684 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 PHYKPLQ8IUZ5 450 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 IQCF2Q8IXL9 164 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 C2CD4AQ8NCU7 369 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 CANT1Q8WVQ1 401 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 TADA1Q96BN2 335 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 SLC45A3Q96JT2 553 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 HSPA12BQ96MM6 686 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 SLC2A4RGQ9NR83 387 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 WNT16Q9UBV4 365 aa8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-209ENST00000509277 HMX2A2RU54 273 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 LAMTOR5O43504 91 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 TSPAN6O43657 245 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 SDC3O75056 442 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ATG13O75143 517 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 BMP10O95393 424 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 CPA3P15088 417 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ZNF12P17014 697 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 XIAPP98170 497 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ZNF549Q6P9A3 640 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 PAGE2Q7Z2X7 111 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 GPR180Q86V85 440 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 RELL1Q8IUW5 271 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 MAPK15Q8TD08 544 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 EEF1AKMT1Q8WVE0 214 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ANKRD49Q8WVL7 239 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 JPH3Q8WXH2 748 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 GLYATL1Q969I3 302 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 TTYH2Q9BSA4 534 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 CARS2Q9HA77 564 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ADPRHL2Q9NX46 363 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 XPR1Q9UBH6 696 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ZFR2Q9UPR6 939 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 PLEKHM1Q9Y4G2 1056 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 TMEM202A6NGA9 273 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 DEAF1O75398 565 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 TCEA3O75764 348 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 SCO1O75880 301 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 OR56A5P0C7T3 313 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ZNF30P17039 623 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ACRV1P26436 265 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 RPS21P63220 83 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 PRKCQQ04759 706 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 CAPRIN1Q14444 709 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 OGFRL1Q5TC84 451 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 GPR153Q6NV75 609 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 NIPAL1Q6NVV3 410 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 KBTBD6Q86V97 674 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 ELMOD2Q8IZ81 293 aa8.44□□□□□ -1.06
LIMCH1-209ENST00000509277 PJA1Q8NG27 643 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms