RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 KDELC1Q6UW63 502 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 C6orf89Q6UWU4 347 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 IKBIPQ70UQ0 350 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PPP1R3BQ86XI6 285 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CENPLQ8N0S6 344 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ATG16L2Q8NAA4 619 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PCDH19Q8TAB3 1148 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 EPS8L3Q8TE67 593 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SELENOMQ8WWX9 145 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PLEKHG4BQ96PX9 1271 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 HDAC8Q9BY41 377 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 THAP2Q9H0W7 228 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 DIABLOQ9NR28 239 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ABHD10Q9NUJ1 306 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 WHRNQ9P202 907 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 B4GALT7Q9UBV7 327 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SH3GLB1Q9Y371 365 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 NEU2Q9Y3R4 380 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PCDHGA6Q9Y5G7 932 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 V9GYQ6 96 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 IGKV6-21A0A0C4DH24 114 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TRGV8A0A0C4DH27 118 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 H0Y3Z8 333 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 OR1F1O43749 312 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 AKAP8O43823 692 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 DLX3O60479 287 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 OR2B3O76000 313 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 NADKO95544 446 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TP53P04637 393 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PROS1P07225 676 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 NR1D1P20393 614 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 BCKDHBP21953 392 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MSX1P28360 303 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ADPRHP54922 357 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MAZP56270 477 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CHRNB3Q05901 458 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 LGALS3BPQ08380 585 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MRPL49Q13405 166 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CYLC2Q14093 348 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 NDUFAF6Q330K2 333 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ESCO2Q56NI9 601 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MROH9Q5TGP6 573 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 FBXO42Q6P3S6 717 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RGS9BPQ6ZS82 235 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 USP49Q70CQ1 688 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 NUP54Q7Z3B4 507 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ANKRD53Q8N9V6 530 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PLA2G15Q8NCC3 412 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 C3orf20Q8ND61 904 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 OR4K17Q8NGC6 315 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF398Q8TD17 642 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ASZ1Q8WWH4 475 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ASB15Q8WXK1 588 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF516Q92618 1163 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF578Q96N58 590 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 OSBPL7Q9BZF2 842 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 COQ3Q9NZJ6 369 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 COPG2Q9UBF2 871 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ACOT9Q9Y305 439 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MRPS2Q9Y399 296 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 LYVE1Q9Y5Y7 322 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ESPL1Q14674 2120 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF726A6NNF4 738 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 K7EQS6 105 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 AHCYL1O43865 530 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 WBP4O75554 376 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SCRG1O75711 98 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ATP5HO75947 161 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 BEST1O76090 585 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SEC24DO94855 1032 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 WDPCPO95876 746 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 POU2F2P09086 479 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 IRF2P14316 349 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TPP2P29144 1249 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MIPP30301 263 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CCR2P41597 374 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 DSC2Q02487 901 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF33BQ06732 778 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 C2orf54Q08AI8 447 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SLC14A1Q13336 389 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 NFATC4Q14934 902 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CCDC58Q4VC31 144 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PRSS36Q5K4E3 855 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 FAM91A1Q658Y4 838 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SCIMPQ6UWF3 145 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CASP12Q6UXS9 341 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 GK5Q6ZS86 529 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ASB18Q6ZVZ8 466 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SLC22A9Q8IVM8 553 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RBFAQ8N0V3 343 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SH2D3CQ8N5H7 860 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZBTB2Q8N680 514 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MFSD2AQ8NA29 543 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 DCAF4L2Q8NA75 395 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 C3orf58Q8NDZ4 430 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 GLIS3Q8NEA6 775 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 HTR3CQ8WXA8 447 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SEC14L1Q92503 715 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TESCQ96BS2 214 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TCF12Q99081 682 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms