RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ALG11Q2TAA5 492 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 KCTD11Q693B1 232 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 CES5AQ6NT32 575 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 TMEM53Q6P2H8 277 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 RBM23Q86U06 439 aaKnown RBP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 TRIM48Q8IWZ4 208 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 CDH26Q8IXH8 852 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 CARFQ8N187 725 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 FBXO36Q8NEA4 188 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 CALML6Q8TD86 181 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 EXT2Q93063 718 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 TADA1Q96BN2 335 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 HMCESQ96FZ2 354 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 WDR83Q9BRX9 315 aaKnown RBP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 MANSC1Q9H8J5 431 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 MLXIPLQ9NP71 852 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 G6PC2Q9NQR9 355 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 MPP6Q9NZW5 540 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 PSMC3IPQ9P2W1 217 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 WDR37Q9Y2I8 494 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 MFHAS1Q9Y4C4 1052 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 ANKRD36A6QL64 1941 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 C1QTNF9BB2RNN3 333 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 PRPF4O43172 522 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 SNX3O60493 162 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 WFS1O76024 890 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 PEX11BO96011 259 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 CA4P22748 312 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 STX2P32856 288 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 DOC2AQ14183 400 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 RPS6KA2Q15349 733 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 KLHL38Q2WGJ6 581 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 STK32CQ86UX6 486 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 PALM2Q8IXS6 379 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 GDAP1Q8TB36 358 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 CCDC110Q8TBZ0 833 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 SMARCD2Q92925 531 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 MAGEB18Q96M61 343 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 SLC22A12Q96S37 553 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 SMC6Q96SB8 1091 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 CYP2S1Q96SQ9 504 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 POLR1EQ9GZS1 481 aaKnown RBP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 OR10A4Q9H209 315 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 TP63Q9H3D4 680 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 MRM3Q9HC36 420 aaKnown RBP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 FKBP14Q9NWM8 211 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 HCFC1R1Q9NWW0 138 aa6.95□□□□□ -1.3
CLCN3-206ENST00000507875 UBA2Q9UBT2 640 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 SMG5Q9UPR3 1016 aaKnown RBP6.95□□□□□ -1.3
CLCN3-206ENST00000507875 A0A1W2PQ67 120 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 A8MV72 311 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 M0QYG6 137 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PER2O15055 1255 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PSPNO60542 156 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 METTL18O95568 372 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 NFATC1O95644 943 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 JCHAINP01591 159 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PROCP04070 461 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 GRPP07492 148 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 UBL4AP11441 157 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 IL9P15248 144 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 CEBPBP17676 345 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 NTSR1P30989 418 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PRKAR1BP31321 381 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ALDH3A2P51648 485 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ALDH18A1P54886 795 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 IL9RQ01113 521 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RTP5Q14D33 572 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 LACTB2Q53H82 288 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PLAG1Q6DJT9 500 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 BMP8AQ7Z5Y6 402 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ADHFE1Q8IWW8 467 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 KDM1BQ8NB78 822 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 AGBL5Q8NDL9 886 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 OR7D4Q8NG98 312 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 DEPDC1BQ8WUY9 529 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 OSCP1Q8WVF1 389 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PEX13Q92968 403 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 IRF7Q92985 503 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ISG20Q96AZ6 181 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 TCEAL4Q96EI5 215 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 IMP4Q96G21 291 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 CELF6Q96J87 481 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RANBP9Q96S59 729 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ADNPQ9H2P0 1102 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 TRABDQ9H4I3 376 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ACTR5Q9H9F9 607 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 SPHK2Q9NRA0 654 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 FGFR1OP2Q9NVK5 253 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RBM22Q9NW64 420 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 SMPD4Q9NXE4 827 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 MOCS1Q9NZB8 636 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ACTR3BQ9P1U1 418 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 CDH7Q9ULB5 785 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 OR51B4Q9Y5P0 310 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 TEX264Q9Y6I9 313 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 FAM90A20PA6NIJ5 464 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 SDR42E2A6NKP2 422 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms