RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 NPY2RP49146 381 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 EIF3BP55884 814 aaKnown RBP13.9□□□□□ -0.18
SEC24D-208ENST00000506622 PER3P56645 1201 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 CRADDP78560 199 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 KLC1Q07866 573 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 NAA25Q14CX7 972 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 MUM1Q2TAK8 710 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 CCSMST1Q4G0I0 132 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 FRMPD2BQ6IN97 320 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 LINC00696Q6ZRV3 163 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 SDCCAG8Q86SQ7 713 aaPredicted RBP13.9□□□□□ -0.18
SEC24D-208ENST00000506622 TMEM139Q8IV31 216 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 PRSS58Q8IYP2 241 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 OR2A1Q8NGT9 310 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 FAR1Q8WVX9 515 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 LMF1Q96S06 567 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 EIF2B3Q9NR50 452 aaKnown RBP13.9□□□□□ -0.18
SEC24D-208ENST00000506622 TREX1Q9NSU2 369 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 RUVBL2Q9Y230 463 aaKnown RBP13.9□□□□□ -0.18
SEC24D-208ENST00000506622 OSGIN2Q9Y236 505 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 KLK4Q9Y5K2 254 aa13.9□□□□□ -0.18
SEC24D-208ENST00000506622 LOC105369274A0A096LPK9 316 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 LOC102723532A0A0G2JNH3 316 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 ENO4A6NNW6 628 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 MAP2K7O14733 419 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 HPP00738 406 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 ZGLP1P0C6A0 271 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 ZSCAN5DPP0CG00 497 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 CMPK1P30085 196 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 RPL22P35268 128 aaKnown RBP13.9□□□□□ -0.19
SEC24D-208ENST00000506622 MRNIPQ6NTE8 343 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 C4orf22Q6V702 233 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 KBTBD2Q8IY47 623 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 OR4N4Q8N0Y3 316 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 DTWD1Q8N5C7 304 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 ZFYVE21Q9BQ24 234 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 ZNF160Q9HCG1 818 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 SPATA7Q9P0W8 599 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 C3orf18Q9UK00 162 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 CDC14AQ9UNH5 594 aa13.9□□□□□ -0.19
SEC24D-208ENST00000506622 A0A1W2PPV9 198 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 KRT87PA6NCN2 255 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 H3BMM5 538 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 VPS26AO75436 327 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 USP1O94782 785 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 VAPBO95292 243 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 FBLP22087 321 aaKnown RBP13.89□□□□□ -0.19
SEC24D-208ENST00000506622 CXCR2P25025 360 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 NMBRP28336 390 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 FMO4P31512 558 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 BASP1P80723 227 aaKnown RBP13.89□□□□□ -0.19
SEC24D-208ENST00000506622 Q0VFX4 171 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 MFAP5Q13361 173 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 RPS6KA1Q15418 735 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 CCNG2Q16589 344 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 ANKRD20A4Q4UJ75 823 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 VWA2Q5GFL6 755 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 FAM180AQ6UWF9 173 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 RNF44Q7L0R7 432 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 NDUFAF7Q7L592 441 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 GSTA5Q7RTV2 222 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 OR1N1Q8NGS0 311 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 CABS1Q96KC9 395 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 DPH7Q9BTV6 452 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 ACAT2Q9BWD1 397 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 YIPF2Q9BWQ6 316 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 TSGA10Q9BZW7 698 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 TSR3Q9UJK0 312 aaKnown RBP13.89□□□□□ -0.19
SEC24D-208ENST00000506622 GUCA1BQ9UMX6 200 aa13.89□□□□□ -0.19
SEC24D-208ENST00000506622 DRG1Q9Y295 367 aaKnown RBP13.89□□□□□ -0.19
SEC24D-208ENST00000506622 PCNX1Q96RV3 2341 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 NSG1A0A0A6YYJ2 146 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 DYTNA2CJ06 578 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 OR2A25A4D2G3 310 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 PRPF4O43172 522 aaKnown RBP eCLIP13.88□□□□□ -0.19
SEC24D-208ENST00000506622 NRP2O60462 931 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 PHF2O75151 1096 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 KLHL18O94889 574 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 MED26O95402 600 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 MATN4O95460 622 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 UQCRHP07919 91 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 CHRM3P20309 590 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 RPA3P35244 121 aaPredicted RBP13.88□□□□□ -0.19
SEC24D-208ENST00000506622 EMP2P54851 167 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 ARG2P78540 354 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 TSTA3Q13630 321 aaPredicted RBP13.88□□□□□ -0.19
SEC24D-208ENST00000506622 FASTKQ14296 549 aaKnown RBP13.88□□□□□ -0.19
SEC24D-208ENST00000506622 CTSL3PQ5NE16 218 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 RNF187Q5TA31 235 aaPredicted RBP13.88□□□□□ -0.19
SEC24D-208ENST00000506622 ATG9BQ674R7 924 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 RPUSD3Q6P087 351 aaKnown RBP13.88□□□□□ -0.19
SEC24D-208ENST00000506622 FBXO42Q6P3S6 717 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 SLC34A3Q8N130 599 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 BCORP1Q8N888 145 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 CATSPER1Q8NEC5 780 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 OR9A1PQ8NGU1 263 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 SMPDL3AQ92484 453 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 C8orf44Q96CB5 159 aa13.88□□□□□ -0.19
SEC24D-208ENST00000506622 MAGEB10Q96LZ2 347 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms