RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CRB3Q9BUF7 120 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.68□□□□□ -1.02
DHFR-202ENST00000504396 WDR54Q9H977 334 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 ZNF160Q9HCG1 818 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 CUTCQ9NTM9 273 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 OR6C2Q9NZP2 312 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 IFNKQ9P0W0 207 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 CIDEBQ9UHD4 219 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 NXT1Q9UKK6 140 aaKnown RBP8.68□□□□□ -1.02
DHFR-202ENST00000504396 TRIM33Q9UPN9 1127 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 MAU2Q9Y6X3 613 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 ZGRF1Q86YA3 2104 aa8.68□□□□□ -1.02
DHFR-202ENST00000504396 hCG_1818297A0A087WSY0 165 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 TRBV5-4A0A0C4DH59 114 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 A6NHS1 94 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 H7C0S8 307 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 APOC4-APOC2K7ER74 178 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 CCL21O00585 134 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 MAP2K7O14733 419 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 DSCR3O14972 297 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 UNC5CO95185 931 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 ZRANB2O95218 330 aaKnown RBP eCLIP8.67□□□□□ -1.02
DHFR-202ENST00000504396 ONECUT2O95948 504 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 F10P00742 488 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 APOC2P02655 101 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 FTH1P02794 183 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 ACPPP15309 386 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 MCM3P25205 808 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 ADRA1AP35348 466 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 PTGER4P35408 488 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 OR1D4P47884 311 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 HADHBP55084 474 aaKnown RBP8.67□□□□□ -1.02
DHFR-202ENST00000504396 ART3Q13508 389 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 GRM7Q14831 915 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 KIR2DS3Q14952 304 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 NKG7Q16617 165 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 YOD1Q5VVQ6 348 aaPredicted RBP8.67□□□□□ -1.02
DHFR-202ENST00000504396 RPUSD3Q6P087 351 aaKnown RBP8.67□□□□□ -1.02
DHFR-202ENST00000504396 TMEM207Q6UWW9 146 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 OVCH1Q7RTY7 1134 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 MRGPRGQ86SM5 289 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 TMTC1Q8IUR5 882 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 MCATQ8IVS2 390 aaKnown RBP8.67□□□□□ -1.02
DHFR-202ENST00000504396 KATNAL2Q8IYT4 538 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 RCOR2Q8IZ40 523 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 DNAJC22Q8N4W6 341 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 OR5K2Q8NHB8 316 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 ITLN2Q8WWU7 325 aaPredicted RBP8.67□□□□□ -1.02
DHFR-202ENST00000504396 CCDC42Q96M95 316 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 TBL1YQ9BQ87 522 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 SELENOSQ9BQE4 189 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 HEMGNQ9BXL5 484 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 SLC26A1Q9H2B4 701 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 ARNT2Q9HBZ2 717 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 CHST11Q9NPF2 352 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 TPSG1Q9NRR2 321 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 SEMA3GQ9NS98 782 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 SLC22A11Q9NSA0 550 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 INTS7Q9NVH2 962 aaKnown RBP8.67□□□□□ -1.02
DHFR-202ENST00000504396 PLA2G3Q9NZ20 509 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 IL1RAPL1Q9NZN1 696 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 PTGFRNQ9P2B2 879 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 IMPACTQ9P2X3 320 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.67□□□□□ -1.02
DHFR-202ENST00000504396 CSMD1Q96PZ7 3565 aa8.67□□□□□ -1.02
DHFR-202ENST00000504396 SNRNP200O75643 2136 aaKnown RBP8.66□□□□□ -1.02
DHFR-202ENST00000504396 F8W8V4 182 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 KCNN4O15554 427 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 DEAF1O75398 565 aaPredicted RBP8.66□□□□□ -1.02
DHFR-202ENST00000504396 KLHL18O94889 574 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 FKBP9O95302 570 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 AP2A1O95782 977 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 TPM1P09493 284 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 PEBP1P30086 187 aaKnown RBP8.66□□□□□ -1.02
DHFR-202ENST00000504396 GRIA3P42263 894 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 CASP6P55212 293 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 OCA2Q04671 838 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 CACNG1Q06432 222 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 MSLNQ13421 630 aaPredicted RBP8.66□□□□□ -1.02
DHFR-202ENST00000504396 DARS2Q6PI48 645 aaKnown RBP8.66□□□□□ -1.02
DHFR-202ENST00000504396 CNSTQ6PJW8 725 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 BNC2Q6ZN30 1099 aaPredicted RBP8.66□□□□□ -1.02
DHFR-202ENST00000504396 ARHGEF18Q6ZSZ5 1173 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 BBS12Q6ZW61 710 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 COX15Q7KZN9 410 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 NLRP9Q7RTR0 991 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 CDKL3Q8IVW4 592 aaPredicted RBP8.66□□□□□ -1.02
DHFR-202ENST00000504396 KBTBD2Q8IY47 623 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 SIRT6Q8N6T7 355 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 LMNTD1Q8N9Z9 388 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 OR11G2Q8NGC1 345 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 CFAP61Q8NHU2 1237 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 FLVCR1-AS1Q8TAF5 88 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 NR4A3Q92570 626 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 SLC22A18Q96BI1 424 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 C8orf44Q96CB5 159 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 CCDC120Q96HB5 630 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 FAM118BQ9BPY3 351 aa8.66□□□□□ -1.02
DHFR-202ENST00000504396 GORASP1Q9BQQ3 440 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms