RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ZNF883P0CG24 379 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TCF4P15884 667 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ATF4P18848 351 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 AKT1P31749 480 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 BTG1P62324 171 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ADARB1P78563 741 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PRKG2Q13237 762 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CA9Q16790 459 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 LRRC26Q2I0M4 334 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 COL28A1Q2UY09 1125 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PGS1Q32NB8 556 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 NBPF12Q5TAG4 269 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TDRD10Q5VZ19 366 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MBLAC2Q68D91 279 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF470Q6ECI4 717 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MFSD7Q6UXD7 560 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RNF19BQ6ZMZ0 732 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RFX8Q6ZV50 586 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PAGE2Q7Z2X7 111 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 DNAJB7Q7Z6W7 309 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 LILRA2Q8N149 483 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ITFG1Q8TB96 612 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 FAM174AQ8TBP5 190 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 DYNC2LI1Q8TCX1 351 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 AGR3Q8TD06 166 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SETD7Q8WTS6 366 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SDR42E1Q8WUS8 393 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 USP7Q93009 1102 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 HGDQ93099 445 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TCEAL3Q969E4 200 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RNF166Q96A37 237 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ELMO3Q96BJ8 720 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF707Q96C28 371 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 IMP4Q96G21 291 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CRELD1Q96HD1 420 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PPP3R2Q96LZ3 170 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PITX2Q99697 317 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CPNE1Q99829 537 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF649Q9BS31 505 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TRIM8Q9BZR9 551 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ACTL8Q9H568 366 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 LIN28AQ9H9Z2 209 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 NMRAL1Q9HBL8 299 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PAQR5Q9NXK6 330 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 EBF1Q9UH73 591 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 GON4LQ3T8J9 2241 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TECTAO75443 2155 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 FAM240BA0A1B0GVZ2 78 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 OR6C75A6NL08 312 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 E9PAM4 449 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 GFYI3L273 518 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 UPK1AO00322 258 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 HMGB3O15347 200 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 INMTO95050 263 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MMP3P08254 477 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SMIM6P0DI80 62 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RAP2AP10114 183 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ARF4P18085 180 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 IL1R2P27930 398 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 HMGCLP35914 325 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RABIFP47224 123 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SLC7A2P52569 658 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 HK3P52790 923 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PLA2G16P53816 162 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 LRRC66Q68CR7 880 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MPZL3Q6UWV2 235 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF627Q7L945 461 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TRIM46Q7Z4K8 759 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SYVN1Q86TM6 617 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 AMIGO1Q86WK6 493 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 LYSMD2Q8IV50 215 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ZZZ3Q8IYH5 903 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 NLGN2Q8NFZ4 835 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MUL1Q969V5 352 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MRGPRX3Q96LB0 322 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 WDFY2Q96P53 400 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CITED4Q96RK1 184 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 KLF6Q99612 283 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 GPR22Q99680 433 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 NIF3L1Q9GZT8 377 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 KLHL31Q9H511 634 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 COG4Q9H9E3 785 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 NANOGQ9H9S0 305 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 KLHL1Q9NR64 748 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 DECR2Q9NUI1 292 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ACOXLQ9NUZ1 547 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CACNA2D2Q9NY47 1150 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PCDHB8Q9UN66 801 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PCDHGB6Q9Y5F9 930 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RNF215Q9Y6U7 377 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 LOC105371267A0A1B0GV96 52 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ANKRD63C9JTQ0 380 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TO15178 435 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CAPN5O15484 640 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 IRAK2O43187 625 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 AIREO43918 545 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SOAT2O75908 522 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 NGFRP08138 427 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ALOX12P18054 663 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 HTR1EP28566 365 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms