RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 HIST1H2ADP20671 130 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 PMS2P54278 862 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 VSX2P58304 361 aaPredicted RBP21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 IL2P60568 153 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 C2orf54Q08AI8 447 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 NKAIN1Q4KMZ8 207 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 RBM20Q5T481 1227 aaKnown RBP21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 TRMT10BQ6PF06 316 aaKnown RBP21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 PAQR3Q6TCH7 311 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 RAB43Q86YS6 212 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 ZBED8Q8IZ13 594 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 PYROXD1Q8WU10 500 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 ZNF480Q8WV37 535 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 ABHD17AQ96GS6 310 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 HIST1H2AHQ96KK5 128 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 HIST1H2AJQ99878 128 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 H2AFJQ9BTM1 129 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 ANKMY1Q9P2S6 941 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 TAC3Q9UHF0 121 aa21.13■□□□□ 0.97
CCHCR1-217ENST00000503420 RAD51CO43502 376 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 SLC28A2O43868 658 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 EIF2S1P05198 315 aaKnown RBP21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 CAPN1P07384 714 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 CDKN2DP55273 166 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 ABATP80404 500 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 PRDX1Q06830 199 aaKnown RBP21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 IL10RAQ13651 578 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 WASHC2DQ5SRD0 308 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 HECTD2Q5U5R9 776 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 ZNF385CQ66K41 422 aaPredicted RBP21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 FAM45BPQ6NSW5 357 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 APLFQ8IW19 511 aaPredicted RBP21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 PPFIBP2Q8ND30 876 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 FAM45AQ8TCE6 357 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 LINGO1Q96FE5 620 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 CCDC138Q96M89 665 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 TRIM54Q9BYV2 358 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 RAB17Q9H0T7 212 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 PARVBQ9HBI1 364 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 ZNF71Q9NQZ8 489 aaPredicted RBP21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 ACSS2Q9NR19 701 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 CUTCQ9NTM9 273 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 NSMCE4AQ9NXX6 385 aa21.12■□□□□ 0.97
CCHCR1-217ENST00000503420 SNRNP200O75643 2136 aaKnown RBP21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 A0A1B0GX78 115 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 E7ENX8 843 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 E7ESA3 106 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 SLC16A5O15375 505 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 CTSVO60911 334 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 FOLR3P41439 243 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 NFKB2Q00653 900 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 TAP2Q03519 686 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 CKAP4Q07065 602 aaKnown RBP21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 SP140Q13342 867 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 LACTB2Q53H82 288 aaPredicted RBP21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 ICE2Q659A1 982 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 ADCK2Q7Z695 626 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 ZFYVE21Q9BQ24 234 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 PLCD4Q9BRC7 762 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 PLAC1Q9HBJ0 212 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 SLC17A6Q9P2U8 582 aa21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 G3BP2Q9UN86 482 aaKnown RBP21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 PTRH2Q9Y3E5 179 aaKnown RBP21.11■□□□□ 0.97
CCHCR1-217ENST00000503420 HYKKA2RU49 373 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 OR2A25A4D2G3 310 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 ARGFXA6NJG6 315 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 DSCR3O14972 297 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 EIF3HO15372 352 aaKnown RBP eCLIP21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 PLA2G2AP14555 144 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 OTX2P32243 289 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 TIAL1Q01085 375 aaKnown RBP eCLIP21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 ILF2Q12905 390 aaKnown RBP21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 SSPNQ14714 243 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 SLC9A5Q14940 896 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 STRA8Q7Z7C7 330 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 PTRH1Q86Y79 214 aaKnown RBP21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 SPNS2Q8IVW8 549 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 RERGQ96A58 199 aaPredicted RBP21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 ZNF285Q96NJ3 590 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 IP6K3Q96PC2 410 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 WDR83Q9BRX9 315 aaKnown RBP21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 PCBD2Q9H0N5 130 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 ING2Q9H160 280 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 SLC6A20Q9NP91 592 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 SAYSD1Q9NPB0 183 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 CCDC177Q9NQR7 707 aaPredicted RBP21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 TLK1Q9UKI8 766 aa21.1■□□□□ 0.97
CCHCR1-217ENST00000503420 TP73O15350 636 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 SAT1P21673 171 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 CCL11P51671 97 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 RRADP55042 308 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 CAV1Q03135 178 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 FASTKD3Q14CZ7 662 aaKnown RBP21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 FAM69BQ5VUD6 431 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 FBXO42Q6P3S6 717 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 ATG14Q6ZNE5 492 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 RNF44Q7L0R7 432 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 SLC26A11Q86WA9 606 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 CDKL2Q92772 493 aa21.09■□□□□ 0.97
CCHCR1-217ENST00000503420 PTERQ96BW5 349 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms