RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 TMED5Q9Y3A6 229 aa17.64■□□□□ 0.41
LINC00535-201ENST00000501400 CROCCQ5TZA2 2017 aa17.64■□□□□ 0.41
LINC00535-201ENST00000501400 TMEM265A0A087WTH1 108 aa17.63■□□□□ 0.41
LINC00535-201ENST00000501400 ACP5P13686 325 aa17.63■□□□□ 0.41
LINC00535-201ENST00000501400 ATP6V1B2P21281 511 aa17.63■□□□□ 0.41
LINC00535-201ENST00000501400 RPL10P27635 214 aaKnown RBP17.63■□□□□ 0.41
LINC00535-201ENST00000501400 SMAD4Q13485 552 aaKnown RBP17.63■□□□□ 0.41
LINC00535-201ENST00000501400 DDX39BQ13838 428 aaKnown RBP17.63■□□□□ 0.41
LINC00535-201ENST00000501400 SWT1Q5T5J6 900 aaKnown RBP17.63■□□□□ 0.41
LINC00535-201ENST00000501400 DUS1LQ6P1R4 473 aaKnown RBP17.63■□□□□ 0.41
LINC00535-201ENST00000501400 CHST15Q7LFX5 561 aaPredicted RBP17.63■□□□□ 0.41
LINC00535-201ENST00000501400 OR5K2Q8NHB8 316 aa17.63■□□□□ 0.41
LINC00535-201ENST00000501400 RAD51AP1Q96B01 352 aa17.63■□□□□ 0.41
LINC00535-201ENST00000501400 C11orf24Q96F05 449 aaPredicted RBP17.63■□□□□ 0.41
LINC00535-201ENST00000501400 CCDC177Q9NQR7 707 aaPredicted RBP17.63■□□□□ 0.41
LINC00535-201ENST00000501400 BCAP29Q9UHQ4 241 aa17.63■□□□□ 0.41
LINC00535-201ENST00000501400 WDR37Q9Y2I8 494 aa17.63■□□□□ 0.41
LINC00535-201ENST00000501400 TRIOO75962 3097 aa17.63■□□□□ 0.41
LINC00535-201ENST00000501400 PRSS51A0A1B0GVH4 220 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 SLC31A1O15431 190 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 LATO43561 262 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 NPPAP01160 153 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 PRPS2P11908 318 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 CLDN8P56748 225 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 TSTA3Q13630 321 aaPredicted RBP17.62■□□□□ 0.41
LINC00535-201ENST00000501400 NANOGP8Q6NSW7 305 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 ZFP1Q6P2D0 407 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 SPATA24Q86W54 205 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 ANKRD27Q96NW4 1050 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 TSSK3Q96PN8 268 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 ZBTB18Q99592 522 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 APOOQ9BUR5 198 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 C1QTNF7Q9BXJ2 289 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 SPNS1Q9H2V7 528 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 NANOGQ9H9S0 305 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 PPT2Q9UMR5 302 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 TCRBV3S1A0A5B6 114 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 MAGEB17A8MXT2 336 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 PGRP06401 933 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 CD72P21854 359 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 KELP23276 732 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 GSK3BP49841 420 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 CLCNKAP51800 687 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 PHC1P78364 1004 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 TAF11Q15544 211 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 MUM1Q2TAK8 710 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 ICE2Q659A1 982 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 ATG9BQ674R7 924 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 CAPRIN2Q6IMN6 1127 aaKnown RBP17.62■□□□□ 0.41
LINC00535-201ENST00000501400 NOXRED1Q6NXP6 359 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 KIAA1324Q6UXG2 1013 aaKnown RBP17.62■□□□□ 0.41
LINC00535-201ENST00000501400 CYP2R1Q6VVX0 501 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 PQLC1Q8N2U9 271 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 HUS1BQ8NHY5 278 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 DNAJC9Q8WXX5 260 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 GTF2H4Q92759 462 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 EGLN2Q96KS0 407 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 HHIPQ96QV1 700 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 TIMM29Q9BSF4 260 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 BTBD1Q9H0C5 482 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 BRF2Q9HAW0 419 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 TDRKHQ9Y2W6 561 aaKnown RBP17.62■□□□□ 0.41
LINC00535-201ENST00000501400 DYRK1BQ9Y463 629 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 PLEKHM1Q9Y4G2 1056 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 PCDHGA11Q9Y5H2 935 aa17.62■□□□□ 0.41
LINC00535-201ENST00000501400 KANSL1LA0AUZ9 987 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 KLHL33A6NCF5 533 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 CASQ2O14958 399 aaPredicted RBP17.61■□□□□ 0.41
LINC00535-201ENST00000501400 SLC35G4P0C7Q5 338 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 HSD3B1P14060 373 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 HSD3B2P26439 372 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 PEX2P28328 305 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 ACSL1P33121 698 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 SELPLGQ14242 412 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 SLBPQ14493 270 aaKnown RBP eCLIP17.61■□□□□ 0.41
LINC00535-201ENST00000501400 PYCR3Q53H96 274 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 TMEM31Q5JXX7 168 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 RIMKLAQ8IXN7 391 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 SLC5A11Q8WWX8 675 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 ASB12Q8WXK4 309 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 PPM1MQ96MI6 270 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 EBPLQ9BY08 206 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 EHD1Q9H4M9 534 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 ALG2Q9H553 416 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 UBE2ZQ9H832 354 aaPredicted RBP17.61■□□□□ 0.41
LINC00535-201ENST00000501400 FGF22Q9HCT0 170 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 GEMIN8Q9NWZ8 242 aaKnown RBP17.61■□□□□ 0.41
LINC00535-201ENST00000501400 VPS29Q9UBQ0 182 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 RIMS3Q9UJD0 308 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 MMP17Q9ULZ9 603 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 SUFUQ9UMX1 484 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 KCNK6Q9Y257 313 aa17.61■□□□□ 0.41
LINC00535-201ENST00000501400 PIPSLA2A3N6 862 aa17.6■□□□□ 0.41
LINC00535-201ENST00000501400 POM121BA6NF01 834 aa17.6■□□□□ 0.41
LINC00535-201ENST00000501400 MAPK1P28482 360 aa17.6■□□□□ 0.41
LINC00535-201ENST00000501400 RHDQ02161 417 aa17.6■□□□□ 0.41
LINC00535-201ENST00000501400 TFF2Q03403 129 aa17.6■□□□□ 0.41
LINC00535-201ENST00000501400 PWP1Q13610 501 aa17.6■□□□□ 0.41
LINC00535-201ENST00000501400 MLF2Q15773 248 aaPredicted RBP17.6■□□□□ 0.41
LINC00535-201ENST00000501400 SPATS1Q496A3 300 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms