RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 PLK3Q9H4B4 646 aa1.34□□□□□ -2.19
SGMS1-205ENST00000498514 SELENOKQ9Y6D0 94 aa1.34□□□□□ -2.19
SGMS1-205ENST00000498514 UNC79Q9P2D8 2635 aa1.34□□□□□ -2.2
SGMS1-205ENST00000498514 SHROOM4Q9ULL8 1493 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 HS6ST1O60243 411 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 RSL1D1O76021 490 aaKnown RBP1.33□□□□□ -2.2
SGMS1-205ENST00000498514 MT-ND1P03886 318 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 GIG44P09565 113 aaPredicted RBP1.33□□□□□ -2.2
SGMS1-205ENST00000498514 PRLRP16471 622 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 ZNF133P52736 654 aaPredicted RBP1.33□□□□□ -2.2
SGMS1-205ENST00000498514 ERVK-16P61578 105 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 ZNF415Q09FC8 603 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 LMOD3Q0VAK6 560 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 SGCGQ13326 291 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 NR1D2Q14995 579 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 CELF3Q5SZQ8 465 aaKnown RBP1.33□□□□□ -2.2
SGMS1-205ENST00000498514 CEP57L1Q8IYX8 460 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 C17orf53Q8N3J3 647 aaPredicted RBP1.33□□□□□ -2.2
SGMS1-205ENST00000498514 ARHGEF2Q92974 986 aaKnown RBP1.33□□□□□ -2.2
SGMS1-205ENST00000498514 C4orf45Q96LM5 186 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 CFAP57Q96MR6 1250 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 DGAT2Q96PD7 388 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 HNRNPABQ99729 332 aaKnown RBP1.33□□□□□ -2.2
SGMS1-205ENST00000498514 LRRCC1Q9C099 1032 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 PNNQ9H307 717 aaKnown RBP1.33□□□□□ -2.2
SGMS1-205ENST00000498514 GKN1Q9NS71 199 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 NLGN3Q9NZ94 848 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 EHD2Q9NZN4 543 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 CRCT1Q9UGL9 99 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 ARHGAP26Q9UNA1 814 aa1.33□□□□□ -2.2
SGMS1-205ENST00000498514 IGHV3-20A0A0C4DH32 117 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 RPL37AP8A6NKH3 93 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 ARHGEF33A8MVX0 844 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 FPGTO14772 594 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 SURF4O15260 269 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 TLX2O43763 284 aaPredicted RBP1.32□□□□□ -2.2
SGMS1-205ENST00000498514 EIF2S1P05198 315 aaKnown RBP1.32□□□□□ -2.2
SGMS1-205ENST00000498514 MYOGP15173 224 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 ELAVL4P26378 380 aaKnown RBP1.32□□□□□ -2.2
SGMS1-205ENST00000498514 GIFP27352 417 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 CAMPP49913 170 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 DNA2P51530 1060 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 NDST2P52849 883 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 ACY1Q03154 408 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 IKQ13123 557 aaPredicted RBP1.32□□□□□ -2.2
SGMS1-205ENST00000498514 KIAA0141Q14154 515 aaPredicted RBP1.32□□□□□ -2.2
SGMS1-205ENST00000498514 SIX1Q15475 284 aaPredicted RBP1.32□□□□□ -2.2
SGMS1-205ENST00000498514 TIMM50Q3ZCQ8 353 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 JADE1Q6IE81 842 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 PAMR1Q6UXH9 720 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 CYP26C1Q6V0L0 522 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 TMPRSS11FQ6ZWK6 438 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 MCEMP1Q8IX19 187 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 OR7A2PQ8NGA2 310 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 OR4D10Q8NGI6 311 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 ETNPPLQ8TBG4 499 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 PAIP1Q9H074 479 aaKnown RBP1.32□□□□□ -2.2
SGMS1-205ENST00000498514 PDCL3Q9H2J4 239 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 GGA3Q9NZ52 723 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.32□□□□□ -2.2
SGMS1-205ENST00000498514 NME7Q9Y5B8 376 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 R4GN57 208 aa1.32□□□□□ -2.2
SGMS1-205ENST00000498514 IGHV3-16A0A0C4DH30 117 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 VILLO15195 856 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 TXNL1O43396 289 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 MED24O75448 989 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 ERAL1O75616 437 aaKnown RBP1.31□□□□□ -2.2
SGMS1-205ENST00000498514 UMPSP11172 480 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 JAK1P23458 1154 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 CCR3P51677 355 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 SRPXP78539 464 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 CDK3Q00526 305 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 TLE4Q04727 773 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 SHHQ15465 462 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 C10orf62Q5T681 223 aaPredicted RBP1.31□□□□□ -2.2
SGMS1-205ENST00000498514 GKAP1Q5VSY0 366 aaPredicted RBP1.31□□□□□ -2.2
SGMS1-205ENST00000498514 ENTHD1Q8IYW4 607 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 FAM89BQ8N5H3 189 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 AVL9Q8NBF6 648 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 FLVCR1-AS1Q8TAF5 88 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 KIAA1524Q8TCG1 905 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 CHURC1Q8WUH1 139 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 ITLN1Q8WWA0 313 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 DHX58Q96C10 678 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 FAM20AQ96MK3 541 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 PANK2Q9BZ23 570 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 CYTL1Q9NRR1 136 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 CUTCQ9NTM9 273 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 RPS6KB2Q9UBS0 482 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 Q9UF83 564 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 IL17BQ9UHF5 180 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 PLEKHA6Q9Y2H5 1048 aa1.31□□□□□ -2.2
SGMS1-205ENST00000498514 KLF18A0A0U1RQI7 1052 aa1.3□□□□□ -2.2
SGMS1-205ENST00000498514 A0A1B0GTH9 108 aa1.3□□□□□ -2.2
SGMS1-205ENST00000498514 OR10H2O60403 315 aa1.3□□□□□ -2.2
SGMS1-205ENST00000498514 QDPRP09417 244 aa1.3□□□□□ -2.2
SGMS1-205ENST00000498514 XBP1P17861 261 aa1.3□□□□□ -2.2
SGMS1-205ENST00000498514 PON1P27169 355 aa1.3□□□□□ -2.2
SGMS1-205ENST00000498514 PKLRP30613 574 aa1.3□□□□□ -2.2
SGMS1-205ENST00000498514 RGS2P41220 211 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms