RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZFHX4Q86UP3 3567 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 PKD1L2Q7Z442 2459 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 H3BMH7 237 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 CREG1O75629 220 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 TSPAN12O95859 305 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 CTSBP07858 339 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 PRKAR1AP10644 381 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ALAS2P22557 587 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 PTPN4P29074 926 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 STX2P32856 288 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 SPRP35270 261 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 RORAP35398 523 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 GP5P40197 560 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ARSFP54793 590 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 POU4F1Q01851 419 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ERV3-1Q14264 604 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 USP10Q14694 798 aaKnown RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 TBR1Q16650 682 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 PHKG1Q16816 387 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 PTCHD3Q3KNS1 767 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 KBTBD12Q3ZCT8 623 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 CRTC2Q53ET0 693 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 GRTP1Q5TC63 336 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 RHBDD2Q6NTF9 364 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 FBXO42Q6P3S6 717 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 AGTRAPQ6RW13 159 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 TMEM207Q6UWW9 146 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ZNF517Q6ZMY9 492 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 LRRC56Q8IYG6 542 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 PPM1NQ8N819 430 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 SLC39A7Q92504 469 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 EXTL1Q92935 676 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ALKBH8Q96BT7 664 aaKnown RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 TSPAN17Q96FV3 270 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 BBC3Q96PG8 261 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 RBBP8Q99708 897 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 SELENOSQ9BQE4 189 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 FAM129AQ9BZQ8 928 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 PCBD2Q9H0N5 130 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 TSPYL1Q9H0U9 437 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ATG10Q9H0Y0 220 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 GPAMQ9HCL2 828 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 CCDC177Q9NQR7 707 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ARL15Q9NXU5 204 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 STOX2Q9P2F5 926 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ANKMY1Q9P2S6 941 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 SNX7Q9UNH6 387 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 SRPK3Q9UPE1 567 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
HSPG2-213ENST00000498495 PCM1Q15154 2024 aa12.27□□□□□ -0.44
HSPG2-213ENST00000498495 OR2A25A4D2G3 310 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 TK2O00142 265 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 CTSVO60911 334 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 GUCA1CO95843 209 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 RECKO95980 971 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 EIF2S1P05198 315 aaKnown RBP12.27□□□□□ -0.45
HSPG2-213ENST00000498495 ENO2P09104 434 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-213ENST00000498495 RAB40ALP0C0E4 278 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 ZNF37AP17032 561 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-213ENST00000498495 PHBP35232 272 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 AP1S2P56377 157 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 VSX2P58304 361 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-213ENST00000498495 DCDP81605 110 aaKnown RBP12.27□□□□□ -0.45
HSPG2-213ENST00000498495 CDC20Q12834 499 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 NAE1Q13564 534 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 ZNF460Q14592 562 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 GRM7Q14831 915 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 FAM214AQ32MH5 1076 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 LINC00303Q3SY05 128 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 WASHC2DQ5SRD0 308 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 C1orf189Q5VU69 101 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 YOD1Q5VVQ6 348 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-213ENST00000498495 MLIPQ5VWP3 458 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 LCN10Q6JVE6 187 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 ADCK2Q7Z695 626 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 CEP97Q8IW35 865 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 TTC29Q8NA56 475 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-213ENST00000498495 PROKR1Q8TCW9 393 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 ANKRD7Q92527 254 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 MED8Q96G25 268 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 RUFY1Q96T51 708 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 ZFYVE21Q9BQ24 234 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 C17orf62Q9BQA9 187 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 PLCD4Q9BRC7 762 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 MCMBPQ9BTE3 642 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 NLNQ9BYT8 704 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 FAM117AQ9C073 453 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 POPDC3Q9HBV1 291 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 SLC6A20Q9NP91 592 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 STARD5Q9NSY2 213 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 DHCR7Q9UBM7 475 aaKnown RBP12.27□□□□□ -0.45
HSPG2-213ENST00000498495 NDOR1Q9UHB4 597 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 PTPRQQ9UMZ3 2332 aa12.27□□□□□ -0.45
HSPG2-213ENST00000498495 CDC14CA4D256 554 aa12.26□□□□□ -0.45
HSPG2-213ENST00000498495 C9J4A7 227 aa12.26□□□□□ -0.45
HSPG2-213ENST00000498495 H7BY64 318 aa12.26□□□□□ -0.45
HSPG2-213ENST00000498495 C1QAP02745 245 aa12.26□□□□□ -0.45
HSPG2-213ENST00000498495 CD63P08962 238 aa12.26□□□□□ -0.45
HSPG2-213ENST00000498495 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms