RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SLC27A1Q6PCB7 646 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 IYDQ6PHW0 289 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 TMEM182Q6ZP80 229 aaPredicted RBP3.69□□□□□ -1.82
SMC4-225ENST00000497203 ANO5Q75V66 913 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 SEPT1Q8WYJ6 367 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 ST6GALNAC6Q969X2 333 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 EXOC4Q96A65 974 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 ZNF354BQ96LW1 612 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 PSD2Q9BQI7 771 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 UTP14AQ9BVJ6 771 aaKnown RBP3.69□□□□□ -1.82
SMC4-225ENST00000497203 TRMT61BQ9BVS5 477 aaKnown RBP3.69□□□□□ -1.82
SMC4-225ENST00000497203 FUT8Q9BYC5 575 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 MINDY3Q9H8M7 445 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 TUFT1Q9NNX1 390 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 A4GALTQ9NPC4 353 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 CHST11Q9NPF2 352 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 SDR39U1Q9NRG7 319 aaPredicted RBP3.69□□□□□ -1.82
SMC4-225ENST00000497203 FAM207AQ9NSI2 230 aaPredicted RBP3.69□□□□□ -1.82
SMC4-225ENST00000497203 STUB1Q9UNE7 303 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 MYH14Q7Z406 1995 aaKnown RBP3.69□□□□□ -1.82
SMC4-225ENST00000497203 SCN5AQ14524 2016 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 A4D1N5 150 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 SLC33A1O00400 549 aaPredicted RBP3.68□□□□□ -1.82
SMC4-225ENST00000497203 ZNF263O14978 683 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 ATP6V0E1O15342 81 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 FLRT2O43155 660 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 BAG2O95816 211 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 NR1D1P20393 614 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 OAS2P29728 719 aaKnown RBP3.68□□□□□ -1.82
SMC4-225ENST00000497203 CSTF2P33240 577 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMC4-225ENST00000497203 CDX1P47902 265 aaPredicted RBP3.68□□□□□ -1.82
SMC4-225ENST00000497203 GSDMDP57764 484 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 SULT2A1Q06520 285 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 ZRSR1Q15695 479 aaKnown RBP3.68□□□□□ -1.82
SMC4-225ENST00000497203 RBBP7Q16576 425 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 SMU1Q2TAY7 513 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 GLRA4Q5JXX5 417 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 SLC35D3Q5M8T2 416 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 C9orf50Q5SZB4 431 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 C20orf194Q5TEA3 1177 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 ISCA2Q86U28 154 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 RTN4RL2Q86UN3 420 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 SNX32Q86XE0 403 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 TUSC5Q8IXB3 177 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 CCDC170Q8IYT3 715 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 C10orf53Q8N6V4 93 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 MAPKAPK5-AS1Q8N8E1 139 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 MSANTD4Q8NCY6 345 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 PIGBQ92521 554 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 TM9SF4Q92544 642 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 RIT1Q92963 219 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 TEKT1Q969V4 418 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 TMEM143Q96AN5 459 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 EPYCQ99645 322 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 CPVLQ9H3G5 476 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 MMADHCQ9H3L0 296 aaPredicted RBP3.68□□□□□ -1.82
SMC4-225ENST00000497203 ACTL8Q9H568 366 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 BICC1Q9H694 974 aaKnown RBP3.68□□□□□ -1.82
SMC4-225ENST00000497203 TMEM206Q9H813 350 aa3.68□□□□□ -1.82
SMC4-225ENST00000497203 IGLV9-49A0A0B4J1Y8 123 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 SDR42E2A6NKP2 422 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 P2RY10O00398 339 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 SELENOFO60613 162 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 PRSS1P07477 247 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 ATP6V1B1P15313 513 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 DCTP40126 519 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 SNU13P55769 128 aaKnown RBP3.67□□□□□ -1.82
SMC4-225ENST00000497203 STX1BP61266 288 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 CACNG1Q06432 222 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 ARL16Q0P5N6 197 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 HYAL1Q12794 435 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 TAF10Q12962 218 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 NONOQ15233 471 aaKnown RBP eCLIP3.67□□□□□ -1.82
SMC4-225ENST00000497203 TAZQ16635 292 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 UGP2Q16851 508 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 FUT11Q495W5 492 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 PDLIM3Q53GG5 364 aaPredicted RBP3.67□□□□□ -1.82
SMC4-225ENST00000497203 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
SMC4-225ENST00000497203 ZNF789Q5FWF6 425 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.67□□□□□ -1.82
SMC4-225ENST00000497203 LYSMD4Q5XG99 296 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 C19orf48Q6RUI8 117 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 GBP6Q6ZN66 633 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 USP43Q70EL4 1123 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 SMIM29Q86T20 159 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 ZNF329Q86UD4 541 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 SYCP3Q8IZU3 236 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 EID3Q8N140 333 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 LMNTD1Q8N9Z9 388 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 OR7G3Q8NG95 312 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 OR10Q1Q8NGQ4 319 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 UBLCP1Q8WVY7 318 aaPredicted RBP3.67□□□□□ -1.82
SMC4-225ENST00000497203 P2RX5Q93086 422 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 TSACCQ96A04 125 aaPredicted RBP3.67□□□□□ -1.82
SMC4-225ENST00000497203 PYCR2Q96C36 320 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 ALG14Q96F25 216 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 CCDC43Q96MW1 224 aaKnown RBP3.67□□□□□ -1.82
SMC4-225ENST00000497203 INPP4AQ96PE3 977 aaPredicted RBP3.67□□□□□ -1.82
SMC4-225ENST00000497203 PITPNM3Q9BZ71 974 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 TLE6Q9H808 572 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms