RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 PPANQ9NQ55 473 aaKnown RBP12.78□□□□□ -0.36
RBM28-208ENST00000495327 WHRNQ9P202 907 aa12.78□□□□□ -0.36
RBM28-208ENST00000495327 SLC17A6Q9P2U8 582 aa12.78□□□□□ -0.36
RBM28-208ENST00000495327 HEMK1Q9Y5R4 338 aaPredicted RBP12.78□□□□□ -0.36
RBM28-208ENST00000495327 TNRC6AQ8NDV7 1962 aaKnown RBP12.78□□□□□ -0.36
RBM28-208ENST00000495327 E7ENX8 843 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 MKRN2OSH3BPM6 223 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 DSCR3O14972 297 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 KLF7O75840 302 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 ONECUT2O95948 504 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 C8GP07360 202 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 IMPA1P29218 277 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 CDKN2DP55273 166 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 NFKB2Q00653 900 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 TAP2Q03519 686 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 PDIA2Q13087 525 aaKnown RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 FASTKD3Q14CZ7 662 aaKnown RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 NKAIN1Q4KMZ8 207 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 LACTB2Q53H82 288 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 HP1BP3Q5SSJ5 553 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 C1orf189Q5VU69 101 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 ICE2Q659A1 982 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 ZNF425Q6IV72 752 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 FAM45BPQ6NSW5 357 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 TCTN3Q6NUS6 607 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 MRPL14Q6P1L8 145 aaKnown RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 SUSD1Q6UWL2 747 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 ZNF572Q7Z3I7 529 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 RAB43Q86YS6 212 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 LRRC56Q8IYG6 542 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 MYO1HQ8N1T3 1032 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 C17orf53Q8N3J3 647 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 TTC29Q8NA56 475 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 FBXO36Q8NEA4 188 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 FAM45AQ8TCE6 357 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 ZFYVE21Q9BQ24 234 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 ERP44Q9BS26 406 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 DPH7Q9BTV6 452 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 ACAT2Q9BWD1 397 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 MRPS30Q9NP92 439 aaKnown RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 ZFATQ9P243 1243 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 IFT80Q9P2H3 777 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 NDOR1Q9UHB4 597 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 TAC3Q9UHF0 121 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 GPN3Q9UHW5 284 aaPredicted RBP12.77□□□□□ -0.37
RBM28-208ENST00000495327 SNX24Q9Y343 169 aa12.77□□□□□ -0.37
RBM28-208ENST00000495327 IGKV1-8A0A0C4DH67 115 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 EIF3HO15372 352 aaKnown RBP eCLIP12.76□□□□□ -0.37
RBM28-208ENST00000495327 SLC16A5O15375 505 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 SUV39H1O43463 412 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 RAD51CO43502 376 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 SLC28A2O43868 658 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 NRP2O60462 931 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 TSPAN12O95859 305 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
RBM28-208ENST00000495327 EZRP15311 586 aaKnown RBP12.76□□□□□ -0.37
RBM28-208ENST00000495327 ITGAXP20702 1163 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 FDXRP22570 491 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 YBX1P67809 324 aaKnown RBP12.76□□□□□ -0.37
RBM28-208ENST00000495327 ABATP80404 500 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 RELAQ04206 551 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 PRDX1Q06830 199 aaKnown RBP12.76□□□□□ -0.37
RBM28-208ENST00000495327 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 MGAT5Q09328 741 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 CALCOCO2Q13137 446 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 HECTD2Q5U5R9 776 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 CPZQ66K79 652 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 FRMPD2BQ6IN97 320 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 PAQR3Q6TCH7 311 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 SYT10Q6XYQ8 523 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 TTLL10Q6ZVT0 673 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 SLC26A11Q86WA9 606 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 PAQR7Q86WK9 346 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 ANKMY2Q8IV38 441 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 SPNS2Q8IVW8 549 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 PPFIBP2Q8ND30 876 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 OR2Y1Q8NGV0 311 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 EEF1AKMT1Q8WVE0 214 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 IP6K3Q96PC2 410 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 PLCD4Q9BRC7 762 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 CCDC177Q9NQR7 707 aaPredicted RBP12.76□□□□□ -0.37
RBM28-208ENST00000495327 CUTCQ9NTM9 273 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 NSMCE4AQ9NXX6 385 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 UTP6Q9NYH9 597 aaKnown RBP12.76□□□□□ -0.37
RBM28-208ENST00000495327 MOCS1Q9NZB8 636 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 GRHL1Q9NZI5 618 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 STOX2Q9P2F5 926 aaPredicted RBP12.76□□□□□ -0.37
RBM28-208ENST00000495327 ADAMTS6Q9UKP5 1117 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
RBM28-208ENST00000495327 A0A0J9YVX5 310 aa12.75□□□□□ -0.37
RBM28-208ENST00000495327 ARGFXA6NJG6 315 aa12.75□□□□□ -0.37
RBM28-208ENST00000495327 J3QKU1 62 aa12.75□□□□□ -0.37
RBM28-208ENST00000495327 CNOT3O75175 753 aaKnown RBP12.75□□□□□ -0.37
RBM28-208ENST00000495327 ALBP02768 609 aa12.75□□□□□ -0.37
RBM28-208ENST00000495327 PIM1P11309 404 aaPredicted RBP12.75□□□□□ -0.37
RBM28-208ENST00000495327 FOLR3P41439 243 aa12.75□□□□□ -0.37
RBM28-208ENST00000495327 EMP3P54852 163 aa12.75□□□□□ -0.37
RBM28-208ENST00000495327 VSX2P58304 361 aaPredicted RBP12.75□□□□□ -0.37
RBM28-208ENST00000495327 TBPL1P62380 186 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms