RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TESCQ96BS2 214 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 RBM4BQ9BQ04 359 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 RBM4Q9BWF3 364 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 REXO4Q9GZR2 422 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 FANCEQ9HB96 536 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 THG1LQ9NWX6 298 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 HCFC2Q9Y5Z7 792 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ARHGEF33A8MVX0 844 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 E7EQ34 232 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 WNT9AO14904 365 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 TSPAN6O43657 245 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 RECQL5O94762 991 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 FTH1P02794 183 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF30P17039 623 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ENGP17813 658 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 PRPH2P23942 346 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 CTSCP53634 463 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 NUP107P57740 925 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 NTHL1P78549 312 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 HPCAP84074 193 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 KCNAB2Q13303 367 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 DOC2AQ14183 400 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 SYTL3Q4VX76 610 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 PLPP4Q5VZY2 271 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF773Q6PK81 442 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 GALNT10Q86SR1 603 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 OR5K1Q8NHB7 308 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 PNPT1Q8TCS8 783 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 FBXL8Q96CD0 374 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 REXO5Q96IC2 774 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 AASDHPPTQ9NRN7 309 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ETAA1Q9NY74 926 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 VPS29Q9UBQ0 182 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 NUP214P35658 2090 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CXorf51AA0A1B0GTR3 108 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 TRIM43BA6NCK2 446 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 WASH3PC4AMC7 463 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 H3BMQ9 156 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CLIC1O00299 241 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 MOSPD3O75425 235 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CTSLP07711 333 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 COX7A2P14406 83 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 PRPS1L1P21108 318 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 PBLDP30039 288 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 NNMTP40261 264 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 IL1RL1Q01638 556 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 PIGFQ07326 219 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 DCTN2Q13561 401 aaKnown RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 GTF2H3Q13889 308 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 LAPTM4AQ15012 233 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 DUOXA1Q1HG43 343 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ELMSAN1Q6PJG2 1045 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ZDHHC21Q8IVQ6 265 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 GPR65Q8IYL9 337 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ZCCHC7Q8N3Z6 543 aaKnown RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 RASGEF1AQ8N9B8 481 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 NELL1Q92832 810 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 TRIM43Q96BQ3 446 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 COG8Q96MW5 612 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 MAGIXQ9H6Y5 334 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 EXD2Q9NVH0 621 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 hCG_2014768A0A024R1R8 64 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 SLCO2B1O94956 709 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 TIMP1P01033 207 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 HOXB9P17482 250 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 MATN1P21941 496 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 TTKP33981 857 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 BDKRB1P46663 353 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CBX2Q14781 532 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 MYBPC3Q14896 1274 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 UGT8Q16880 541 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF284Q2VY69 593 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 BROXQ5VW32 411 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 LIPJQ5W064 366 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ADNP2Q6IQ32 1131 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 AGTRAPQ6RW13 159 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CLECL1Q8IZS7 167 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 TRAM1L1Q8N609 369 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CSGALNACT1Q8TDX6 532 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 TMEM159Q96B96 161 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ZSWIM3Q96MP5 696 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 RDH12Q96NR8 316 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 SGK2Q9HBY8 427 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ERVK-11Q9UQG0 969 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 DENND4CQ5VZ89 1909 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 LOC100130705A0A1B0GUX0 176 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 A0A1W2PPW3 197 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CARNS1A5YM72 827 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 MITFO75030 526 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 DIRAS1O95057 198 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CCNDBP1O95273 360 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 RHOP08100 348 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 PTPN2P17706 415 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CRHBPP24387 322 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 RPS6KA3P51812 740 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 TSTA3Q13630 321 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-209ENST00000494623 ACOX1Q15067 660 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 LRRC26Q2I0M4 334 aa10.86□□□□□ -0.67
CHMP3-209ENST00000494623 CTU2Q2VPK5 515 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms