RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ZNF480Q8WV37 535 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 SMPDL3AQ92484 453 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 IP6K3Q96PC2 410 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 NAP1L3Q99457 506 aaPredicted RBP9.33□□□□□ -0.92
UFD1-210ENST00000494054 SPSB2Q99619 263 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 GPR21Q99679 349 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 MESP1Q9BRJ9 268 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 DDX47Q9H0S4 455 aaKnown RBP9.33□□□□□ -0.92
UFD1-210ENST00000494054 SLC26A1Q9H2B4 701 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 CTSFQ9UBX1 484 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 ZC3H7BQ9UGR2 993 aaKnown RBP9.33□□□□□ -0.92
UFD1-210ENST00000494054 VPS9D1Q9Y2B5 631 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 MAP4K5Q9Y4K4 846 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 PCDHGB7Q9Y5F8 929 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 MAU2Q9Y6X3 613 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 FAM169AQ9Y6X4 670 aa9.33□□□□□ -0.92
UFD1-210ENST00000494054 ANKRD12Q6UB98 2062 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 DOPEY2Q9Y3R5 2298 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 USP27XA6NNY8 438 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 E7ENX8 843 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 H0YGG7 62 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 CES2O00748 559 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 SOCS6O14544 535 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 ZSCAN12O43309 604 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 DPM1O60762 260 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 ALOX12BO75342 701 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 ALBP02768 609 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 CATP04040 527 aaKnown RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 EIF2S1P05198 315 aaKnown RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 MMP11P24347 488 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 GABRB3P28472 473 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 CMPK1P30085 196 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 UQCRFS1P47985 274 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 PNLIPRP1P54315 467 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 SOX8P57073 446 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 ARF3P61204 181 aaPredicted RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 TIAL1Q01085 375 aaKnown RBP eCLIP9.32□□□□□ -0.92
UFD1-210ENST00000494054 TAP2Q03519 686 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 TSTA3Q13630 321 aaPredicted RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 ARHGAP19Q14CB8 494 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 FAM214AQ32MH5 1076 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 MSS51Q4VC12 460 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 SLC6A19Q695T7 634 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 NEK10Q6ZWH5 1172 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 PIWIL4Q7Z3Z4 852 aaKnown RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 ATCAYQ86WG3 371 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 PAQR7Q86WK9 346 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 IGDCC3Q8IVU1 814 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 LRRC56Q8IYG6 542 aaPredicted RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 CPNE9Q8IYJ1 553 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 GALNT16Q8N428 558 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 TTC29Q8NA56 475 aaPredicted RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 CD200R1Q8TD46 325 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 GRK7Q8WTQ7 553 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 ASB11Q8WXH4 323 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 KCNJ9Q92806 393 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 INPP5DQ92835 1189 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 FKBP10Q96AY3 582 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 C10orf90Q96M02 699 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 FER1L6-AS2Q96M78 137 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 PLCD4Q9BRC7 762 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 AARSD1Q9BTE6 412 aaKnown RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 SOX17Q9H6I2 414 aaPredicted RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 ZNF552Q9H707 407 aaPredicted RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 WDR54Q9H977 334 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 PLAC1Q9HBJ0 212 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 ZBTB20Q9HC78 741 aaPredicted RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 FAM114A2Q9NRY5 505 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 IARS2Q9NSE4 1012 aaKnown RBP9.32□□□□□ -0.92
UFD1-210ENST00000494054 KLHL42Q9P2K6 505 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 TAC3Q9UHF0 121 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 FBXO5Q9UKT4 447 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 DHRS7Q9Y394 339 aa9.32□□□□□ -0.92
UFD1-210ENST00000494054 USP9XQ93008 2570 aaPredicted RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 GOLGA6L10A0A0M3HER8 536 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 VSTM2BA6NLU5 285 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 GFYI3L273 518 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 AGPSO00116 658 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 DNALI1O14645 258 aaPredicted RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 SLC16A8O95907 504 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 MPC1LP0DKB6 136 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 ERVK-10P10266 1014 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 PIM1P11309 404 aaPredicted RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 PGAM1P18669 254 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 GNLYP22749 145 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 IVDP26440 423 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 RPA3P35244 121 aaPredicted RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 SNRPNP63162 240 aaKnown RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 PRDX1Q06830 199 aaKnown RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 PTK6Q13882 451 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 CRYMQ14894 314 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 MYBPC3Q14896 1274 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 PPP1R7Q15435 360 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 INPP5JQ15735 1006 aaPredicted RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 PRTGQ2VWP7 1150 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 TTLL9Q3SXZ7 439 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 PLEKHN1Q494U1 663 aaPredicted RBP9.31□□□□□ -0.92
UFD1-210ENST00000494054 VWA5B1Q5TIE3 1220 aa9.31□□□□□ -0.92
UFD1-210ENST00000494054 ICE2Q659A1 982 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms