RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 BCL2L11O43521 198 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 XRCC3O43542 346 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 CENPBP07199 599 aaPredicted RBP3.39□□□□□ -1.87
SMC4-223ENST00000493695 OR2T7P0C7T2 308 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 PFKFB1P16118 471 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 GJA1P17302 382 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 PRKACGP22612 351 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 GABRA5P31644 462 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 LIMK1P53667 647 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 UBXN2AP68543 259 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 PRKCZQ05513 592 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 TMEM266Q2M3C6 531 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 RNF212Q495C1 297 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 KLHL26Q53HC5 615 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 SEL1L3Q68CR1 1132 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 CAMKMTQ7Z624 323 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 TMEM173Q86WV6 379 aaPredicted RBP3.39□□□□□ -1.87
SMC4-223ENST00000493695 VANGL1Q8TAA9 524 aaPredicted RBP3.39□□□□□ -1.87
SMC4-223ENST00000493695 ATP8B4Q8TF62 1192 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 AZIN2Q96A70 460 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 MTERF3Q96E29 417 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 LINC00615Q96LM1 132 aaPredicted RBP3.39□□□□□ -1.87
SMC4-223ENST00000493695 SGK494Q96LW2 274 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 LMF2Q9BU23 707 aaKnown RBP3.39□□□□□ -1.87
SMC4-223ENST00000493695 VN1R1Q9GZP7 353 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 ATP13A3Q9H7F0 1226 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 NOL11Q9H8H0 719 aaKnown RBP3.39□□□□□ -1.87
SMC4-223ENST00000493695 A4GALTQ9NPC4 353 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 PIH1D3Q9NQM4 214 aaKnown RBP3.39□□□□□ -1.87
SMC4-223ENST00000493695 OSER1Q9NX31 292 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 WDR35Q9P2L0 1181 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 CLIP2Q9UDT6 1046 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 GRIP1Q9Y3R0 1128 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 ASB14A6NK59 587 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 TSPAN1O60635 241 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 DKC1O60832 514 aaKnown RBP eCLIP3.38□□□□□ -1.87
SMC4-223ENST00000493695 WDPCPO95876 746 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 GPIP06744 558 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 CAPZA2P47755 286 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 RAD23AP54725 363 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 Q6ZRP5 223 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 ATL1Q8WXF7 558 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 GAL3ST4Q96RP7 486 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 OR10A4Q9H209 315 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 GOLPH3LQ9H4A5 285 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 GIMAP2Q9UG22 337 aa3.38□□□□□ -1.87
SMC4-223ENST00000493695 EPM2AB3EWF7 344 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 TRUB2O95900 331 aaKnown RBP3.37□□□□□ -1.87
SMC4-223ENST00000493695 MYBL1P10243 752 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 EEF1DP29692 281 aaKnown RBP3.37□□□□□ -1.87
SMC4-223ENST00000493695 SLC6A6P31641 620 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 KRTAP10-1P60331 282 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 DMPKQ09013 629 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 CALCOCO2Q13137 446 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 PTPRCAPQ14761 206 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 MOGAT2Q3SYC2 334 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 MDH1BQ5I0G3 518 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 CST9LP1Q5W188 147 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 Q8N7P7 452 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 PRSS33Q8NF86 280 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 OLIG1Q8TAK6 271 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 RABEP2Q9H5N1 569 aa3.37□□□□□ -1.87
SMC4-223ENST00000493695 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.37□□□□□ -1.871e-24■■■□□ 16.8
SMC4-223ENST00000493695 EDDM13A0A1B0GTR0 161 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 MSGN1A6NI15 193 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 ACOD1A6NK06 481 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 E9PI62 339 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 H7C0S8 307 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 PHOX2AO14813 284 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 RNASEH1O60930 286 aaKnown RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 CA4P22748 312 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 CPT2P23786 658 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 DNASE1P24855 282 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 SLC9A3P48764 834 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 CSE1LP55060 971 aaKnown RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 GSCP56915 257 aaPredicted RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 TRA2BP62995 288 aaKnown RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 MAT1AQ00266 395 aaKnown RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 ZFP36L1Q07352 338 aaKnown RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 PRPF4BQ13523 1007 aaKnown RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 VWC2Q2TAL6 325 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 C15orf32Q32M92 178 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 KRT80Q6KB66 452 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 PRR27Q6MZM9 219 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 TMPRSS11FQ6ZWK6 438 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 KCNMB4Q86W47 210 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 KRTAP11-1Q8IUC1 163 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 MARVELD2Q8N4S9 558 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 PPFIBP2Q8ND30 876 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 GPRC5AQ8NFJ5 357 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 OR5M8Q8NGP6 311 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 OR6S1Q8NH40 331 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 RNF128Q8TEB7 428 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 TEKT4Q8WW24 435 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 SLAMF9Q96A28 289 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 NXNL1Q96CM4 212 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 PRICKLE1Q96MT3 831 aaPredicted RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 BAG1Q99933 345 aaPredicted RBP3.36□□□□□ -1.87
SMC4-223ENST00000493695 ANKRD2Q9GZV1 360 aa3.36□□□□□ -1.87
SMC4-223ENST00000493695 ST6GALNAC4Q9H4F1 302 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms