RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 NOBOXO60393 691 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 SKAP2O75563 359 aaPredicted RBP12.22□□□□□ -0.45
VPS52-220ENST00000493674 DCTN3O75935 186 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 GIMD1P0DJR0 217 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 JUPP14923 745 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 GNAZP19086 355 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 SERPINB3P29508 390 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 HNF4AP41235 474 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 FASLGP48023 281 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 HTR6P50406 440 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 ZNF33BQ06732 778 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 CHIT1Q13231 466 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 DOC2AQ14183 400 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 GPR18Q14330 331 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 TCHHL1Q5QJ38 904 aaPredicted RBP12.22□□□□□ -0.45
VPS52-220ENST00000493674 GRHL2Q6ISB3 625 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 SUSD1Q6UWL2 747 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 LARP4Q71RC2 724 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS52-220ENST00000493674 CEP68Q76N32 757 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 RABEPKQ7Z6M1 372 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 ADGRF3Q8IZF5 1079 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 AVL9Q8NBF6 648 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 OR2A1Q8NGT9 310 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 FLVCR1-AS1Q8TAF5 88 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 LMX1AQ8TE12 382 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 SLC5A11Q8WWX8 675 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 ATP6V1E2Q96A05 226 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 C3orf30Q96M34 536 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 ZNF385DQ9H6B1 395 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
VPS52-220ENST00000493674 ACTR8Q9H981 624 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 UCK1Q9HA47 277 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 TCF7L2Q9NQB0 619 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 FAM86C1Q9NVL1 165 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 OR6C2Q9NZP2 312 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 HEY2Q9UBP5 337 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 FIS1Q9Y3D6 152 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 TSC22D4Q9Y3Q8 395 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 CCL27Q9Y4X3 112 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 KCNE2Q9Y6J6 123 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 GVINP1Q7Z2Y8 2422 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 H0YIV9 168 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 MANBAO00462 879 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 DIAPH2O60879 1101 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 EPHA3P29320 983 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 IRF8Q02556 426 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 SIM2Q14190 667 aaPredicted RBP12.21□□□□□ -0.45
VPS52-220ENST00000493674 DUOXA1Q1HG43 343 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 LSM12Q3MHD2 195 aaKnown RBP12.21□□□□□ -0.45
VPS52-220ENST00000493674 SPDYAQ5MJ70 313 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 METTL21CQ5VZV1 264 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 OGFOD2Q6N063 350 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 CHSY3Q70JA7 882 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 ALYREFQ86V81 257 aaKnown RBP12.21□□□□□ -0.45
VPS52-220ENST00000493674 AMIGO1Q86WK6 493 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 FAM129CQ86XR2 697 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 FAM46DQ8NEK8 389 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 ABHD11Q8NFV4 315 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 WDR20Q8TBZ3 569 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 METTL6Q8TCB7 284 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 PIGKQ92643 395 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 PTCD3Q96EY7 689 aaKnown RBP12.21□□□□□ -0.45
VPS52-220ENST00000493674 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.45
VPS52-220ENST00000493674 LOXL4Q96JB6 756 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 ELF4Q99607 663 aaPredicted RBP12.21□□□□□ -0.45
VPS52-220ENST00000493674 XKR8Q9H6D3 395 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 PELI2Q9HAT8 420 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 ABCF3Q9NUQ8 709 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 UCKL1Q9NWZ5 548 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 DYRK1BQ9Y463 629 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 PTGDR2Q9Y5Y4 395 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 R4GN57 208 aa12.21□□□□□ -0.45
VPS52-220ENST00000493674 DNAH14Q0VDD8 3507 aa12.21□□□□□ -0.46
VPS52-220ENST00000493674 A0A1B0GTQ1 180 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 CCT8L1PA6NM43 557 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 VPS4BO75351 444 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 CRCPO75575 148 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 EPN2O95208 641 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 CHEK2O96017 543 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 VIPP01282 170 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 LMNAP02545 664 aaKnown RBP12.2□□□□□ -0.46
VPS52-220ENST00000493674 SERPINA6P08185 405 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 CHRM5P08912 532 aaPredicted RBP12.2□□□□□ -0.46
VPS52-220ENST00000493674 C1GALT1C1LP0DN25 315 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 PRPH2P23942 346 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 PSMB5P28074 263 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 EPHA8P29322 1005 aaPredicted RBP12.2□□□□□ -0.46
VPS52-220ENST00000493674 HMOX2P30519 316 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 GRIK2Q13002 908 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 KRT33BQ14525 404 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 ABRAXAS2Q15018 415 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 ZRSR2Q15696 482 aaKnown RBP12.2□□□□□ -0.46
VPS52-220ENST00000493674 XKR6Q5GH73 641 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 CATSPEREQ5SY80 951 aa12.2□□□□□ -0.46
VPS52-220ENST00000493674 C10orf62Q5T681 223 aaPredicted RBP12.2□□□□□ -0.46
VPS52-220ENST00000493674 ICE2Q659A1 982 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms