RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 UXTQ9UBK9 157 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-210ENST00000493582 SLC23A1Q9UHI7 598 aa11.39□□□□□ -0.59
HDAC4-210ENST00000493582 SNX7Q9UNH6 387 aa11.39□□□□□ -0.59
HDAC4-210ENST00000493582 LCHNA4D1U4 455 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 J3KR12 359 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 FFAR3O14843 346 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 GPR42O15529 346 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 GPX5O75715 221 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 TPPPO94811 219 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 HOXA11P31270 313 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 KIR2DL3P43628 341 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 ALDH6A1Q02252 535 aaKnown RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SCN1BQ07699 218 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SLC14A1Q13336 389 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SGO1Q5FBB7 561 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 ZNF551Q7Z340 670 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 FBXO16Q8IX29 292 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 CAMKK1Q8N5S9 505 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 OR4M2Q8NGB6 313 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 OR4F6Q8NGB9 312 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 LRRC20Q8TCA0 184 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 IMP4Q96G21 291 aaKnown RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 HRASLS5Q96KN8 279 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 INPP5KQ9BT40 448 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 ACAT2Q9BWD1 397 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SLC22A4Q9H015 551 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 THUMPD1Q9NXG2 353 aaKnown RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 HOXC10Q9NYD6 342 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 TAS2R13Q9NYV9 303 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 RLFQ13129 1914 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 A8MUA0 341 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 IFRD1O00458 451 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 STX16O14662 325 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 ADRA2AP08913 450 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 CD72P21854 359 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 GZMMP51124 257 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 TAGLNQ01995 201 aaKnown RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 LAMTOR1Q6IAA8 161 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 VWA5B2Q8N398 1253 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 LIX1Q8N485 282 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 OR10T2Q8NGX3 314 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 BRSK1Q8TDC3 778 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 PITX2Q99697 317 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SRRQ9GZT4 340 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 RNF121Q9H920 327 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 FARSBQ9NSD9 589 aaKnown RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 TMEM45AQ9NWC5 275 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 CPA4Q9UI42 421 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 KLK4Q9Y5K2 254 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 TIMM13Q9Y5L4 95 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SMIM28A0A1B0GU29 152 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 NT5C1B-RDH14C9J2C7 533 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 TSPAN3O60637 253 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 AOC2O75106 756 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 PAGE1O75459 146 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 OR7A10O76100 309 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 MOCS2O96007 188 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 FABP3P05413 133 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 MMP2P08253 660 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 ATF4P18848 351 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SSTR4P31391 388 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 ETV3P41162 512 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 MLLT3P42568 568 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 TAF6P49848 677 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 LILRA4P59901 499 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 HSPA14Q0VDF9 509 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 C10orf62Q5T681 223 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 PIK3R6Q5UE93 754 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 CALHM3Q86XJ0 350 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 GPSM1Q86YR5 675 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 PLCZ1Q86YW0 608 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 NLGN4YQ8NFZ3 816 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-210ENST00000493582 OR4L1Q8NH43 312 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 EEF1AKMT1Q8WVE0 214 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 COL21A1Q96P44 957 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 MGLLQ99685 303 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 C17orf62Q9BQA9 187 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 ASPNQ9BXN1 380 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 FAM83DQ9H4H8 585 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 CRTAC1Q9NQ79 661 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SNTG1Q9NSN8 517 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 CATSPERZQ9NTU4 200 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 GLTPQ9NZD2 209 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 SLC6A14Q9UN76 642 aa11.38□□□□□ -0.59
HDAC4-210ENST00000493582 MYBPHLA2RUH7 354 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 TRIM77I1YAP6 450 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 PDGFAP04085 211 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 ZNF250P15622 560 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 PRIM2P49643 509 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 CSNK2BP67870 215 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 BNC1Q01954 994 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 FBXO43Q4G163 708 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 KIAA1841Q6NSI8 718 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 FAM131AQ6UXB0 335 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 RDH10Q8IZV5 341 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 SIDT2Q8NBJ9 832 aaKnown RBP11.37□□□□□ -0.59
HDAC4-210ENST00000493582 CHST13Q8NET6 341 aa11.37□□□□□ -0.59
HDAC4-210ENST00000493582 FCRL2Q96LA5 508 aaPredicted RBP11.37□□□□□ -0.59
HDAC4-210ENST00000493582 ZNF382Q96SR6 550 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms