RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 CYP51A1Q16850 503 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 MYLK3Q32MK0 819 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 PLK5Q496M5 336 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 CRTC2Q53ET0 693 aaPredicted RBP6.83□□□□□ -1.32
HERC4-211ENST00000492996 ZNF648Q5T619 568 aaPredicted RBP6.83□□□□□ -1.32
HERC4-211ENST00000492996 OGFOD2Q6N063 350 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 C8orf82Q6P1X6 216 aaPredicted RBP6.83□□□□□ -1.32
HERC4-211ENST00000492996 C22orf39Q6P5X5 142 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 ZBTB49Q6ZSB9 765 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 SPATA19Q7Z5L4 167 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 TICAM1Q8IUC6 712 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 CYB5D2Q8WUJ1 264 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 ADAMTS14Q8WXS8 1223 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 HOPXQ9BPY8 73 aaPredicted RBP6.83□□□□□ -1.32
HERC4-211ENST00000492996 Q9H521 79 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 THAP10Q9P2Z0 257 aaPredicted RBP6.83□□□□□ -1.32
HERC4-211ENST00000492996 OPTCQ9UBM4 332 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 COQ6Q9Y2Z9 468 aa6.83□□□□□ -1.32
HERC4-211ENST00000492996 DHRS12A0PJE2 317 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 PI15O43692 258 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 NARSO43776 548 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 RSL1D1O76021 490 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 ZNF26P17031 533 aaPredicted RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 PSMD8P48556 350 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TUBA1BP68363 451 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TRAP1Q12931 704 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 PRKG2Q13237 762 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 GAS6Q14393 721 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 CRY1Q16526 586 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 WDR45BQ5MNZ6 344 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SERPINA13PQ6UXR4 307 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 HACD2Q6Y1H2 254 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TUBA1AQ71U36 451 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 EFL1Q7Z2Z2 1120 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 BPHLQ86WA6 291 aaPredicted RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 CATSPER1Q8NEC5 780 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 ING5Q8WYH8 240 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 COPS8Q99627 209 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 KCTD14Q9BQ13 255 aaPredicted RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 C1QTNF3Q9BXJ4 246 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TMEM245Q9H330 911 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 ALG2Q9H553 416 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 BRD9Q9H8M2 597 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 PARD6AQ9NPB6 346 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SLC52A3Q9NQ40 469 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 RYDENQ9NUL5 291 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 ARL15Q9NXU5 204 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 B4GALT6Q9UBX8 382 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 MSRB2Q9Y3D2 182 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TNPO3Q9Y5L0 923 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 TRIOBPQ9H2D6 2365 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 AP1G1O43747 822 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 CLPTM1O96005 669 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 OTCP00480 354 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 PRR35P0CG20 571 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 ZFP36L2P47974 494 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 PTSQ03393 145 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TRAF3Q13114 568 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SIM2Q14190 667 aaPredicted RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 CDKN3Q16667 212 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TMTC4Q5T4D3 741 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 GPRC6AQ5T6X5 926 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 NANOGP8Q6NSW7 305 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 CYP20A1Q6UW02 462 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TPRG1Q6ZUI0 275 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TRIM69Q86WT6 500 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 MINDY1Q8N5J2 469 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 BEND7Q8N7W2 519 aaPredicted RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 TMEM125Q96AQ2 219 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 GRIP2Q9C0E4 1043 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 NANOGQ9H9S0 305 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TBC1D23Q9NUY8 699 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 LEF1Q9UJU2 399 aaPredicted RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 HCN2Q9UL51 889 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 WNT6Q9Y6F9 365 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 RNF103-CHMP3A0A140T963 221 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SOCS2O14508 198 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 LAMTOR5O43504 91 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SOCS5O75159 536 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SEC22BO75396 215 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 RPL10P27635 214 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 OR4D2P58180 307 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 MYBPC1Q00872 1141 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SELPLGQ14242 412 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 RTP5Q14D33 572 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 PCBP2Q15366 365 aaKnown RBP eCLIP6.82□□□□□ -1.322e-10■□□□□ 9.6
HERC4-211ENST00000492996 IMPG1Q17R60 797 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 LY6G5CQ5SRR4 150 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 USP45Q70EL2 814 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 NLRP8Q86W28 1048 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SUN5Q8TC36 379 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 STARD8Q92502 1023 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 SCRN2Q96FV2 425 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 COX4I2Q96KJ9 171 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 TMEM79Q9BSE2 394 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 ACTR8Q9H981 624 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 ITM2CQ9NQX7 267 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 LIMD1Q9UGP4 676 aa6.82□□□□□ -1.32
HERC4-211ENST00000492996 PTBP2Q9UKA9 531 aaKnown RBP6.82□□□□□ -1.32
HERC4-211ENST00000492996 ZNF490Q9ULM2 529 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms