RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CACNA1DQ01668 2161 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 CENPEQ02224 2701 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 KRT87PA6NCN2 255 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 SDR42E2A6NKP2 422 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 ARHGEF33A8MVX0 844 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 GOLGA8KD6RF30 607 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 E7ENX8 843 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 GOLGA8TH3BQL2 631 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 MASP2O00187 686 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 CEP104O60308 925 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 NRP2O60462 931 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 NIPSNAP2O75323 286 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 SEMA7AO75326 666 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 IPO13O94829 963 aaKnown RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 ALPPP05187 535 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 PKMP14618 531 aaKnown RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 ALAS2P22557 587 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 PSMB5P28074 263 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 FMO4P31512 558 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 CXCR5P32302 372 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 HSD17B2P37059 387 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 SKIV2L2P42285 1042 aaKnown RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 BDKRB1P46663 353 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 SARNPP82979 210 aaKnown RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 TAP2Q03519 686 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 PRDX1Q06830 199 aaKnown RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 FASTKQ14296 549 aaKnown RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 ACSBG2Q5FVE4 666 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 PRMT9Q6P2P2 845 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 GSTA5Q7RTV2 222 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 PAQR7Q86WK9 346 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 LMNTD2Q8IXW0 634 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 DTWD1Q8N5C7 304 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 EFCAB3Q8N7B9 438 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 OR11G2Q8NGC1 345 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 GIMAP7Q8NHV1 300 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 ZDHHC19Q8WVZ1 309 aaPredicted RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 KCNJ9Q92806 393 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 C19orf60Q96EN9 201 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 MVB12AQ96EY5 273 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 SIGLEC10Q96LC7 697 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 C10orf90Q96M02 699 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 FOPNLQ96NB1 174 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 OR2A5Q96R48 311 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 SLC30A3Q99726 388 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 PLCD4Q9BRC7 762 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 ZBTB20Q9HC78 741 aaPredicted RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 SLC6A20Q9NP91 592 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 SEMA3GQ9NS98 782 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 CTSFQ9UBX1 484 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 FBXL4Q9UKA2 621 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 RUVBL2Q9Y230 463 aaKnown RBP8□□□□□ -1.13
SMARCB1-207ENST00000491967 CRYL1Q9Y2S2 319 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 JRKLQ9Y4A0 524 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 PCDHGA10Q9Y5H3 936 aa8□□□□□ -1.13
SMARCB1-207ENST00000491967 KCNE1BA0A087WTH5 132 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 BLACEA4D250 179 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 H0YGG7 62 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 EIF3FO00303 357 aaPredicted RBP7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 PFDN6O15212 129 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 DDAH2O95865 285 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 SLC16A8O95907 504 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 KRT14P02533 472 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 ZGLP1P0C6A0 271 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 MPC1LP0DKB6 136 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 PAMP19021 973 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 COILP38432 576 aaPredicted RBP7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 SLC26A3P40879 764 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 OR1D4P47884 311 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 VSX2P58304 361 aaPredicted RBP7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 ARF3P61204 181 aaPredicted RBP7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 TIAL1Q01085 375 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 Q0VFX4 171 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 GPS1Q13098 491 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 MUM1Q2TAK8 710 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 KLHL38Q2WGJ6 581 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 FHL5Q5TD97 284 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 GARNL3Q5VVW2 1013 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 CNSTQ6PJW8 725 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 CUZD1Q86UP6 607 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 TAX1BP1Q86VP1 789 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 REXO1L1PQ8IX06 675 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 CPAMD8Q8IZJ3 1885 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 IQCKQ8N0W5 287 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 ZADH2Q8N4Q0 377 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 RAB42Q8N4Z0 105 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 NAT8LQ8N9F0 302 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 TTC29Q8NA56 475 aaPredicted RBP7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 GSDMBQ8TAX9 411 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 PPP4R1Q8TF05 950 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 COG1Q8WTW3 980 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 ZNF480Q8WV37 535 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 SMPDL3AQ92484 453 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 PBKQ96KB5 322 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 SERPINB12Q96P63 405 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 LMF1Q96S06 567 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 PKP4Q99569 1192 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 MIPEPQ99797 713 aa7.99□□□□□ -1.13
SMARCB1-207ENST00000491967 ZFYVE21Q9BQ24 234 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms