RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 MSH2P43246 934 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 PAX9P55771 341 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 FKBP1AP62942 108 aaKnown RBP3.18□□□□□ -1.9
PHC3-213ENST00000491258 CSTF3Q12996 717 aaKnown RBP3.18□□□□□ -1.9
PHC3-213ENST00000491258 CCDC57Q2TAC2 916 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 SOWAHCQ53LP3 525 aaPredicted RBP3.18□□□□□ -1.9
PHC3-213ENST00000491258 ADALQ6DHV7 355 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 FAM9BQ8IZU0 186 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 MARVELD2Q8N4S9 558 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 TDRD7Q8NHU6 1098 aaKnown RBP3.18□□□□□ -1.9
PHC3-213ENST00000491258 C9orf78Q9NZ63 289 aaPredicted RBP3.18□□□□□ -1.9
PHC3-213ENST00000491258 NAALADL1Q9UQQ1 740 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 TJP1Q07157 1748 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 ZNF609O15014 1411 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 UBR3Q6ZT12 1888 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 KDM3AQ9Y4C1 1321 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 SZT2Q5T011 3432 aa3.18□□□□□ -1.9
PHC3-213ENST00000491258 CLRN2A0PK11 232 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 TMCC2O75069 709 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 PRKRAO75569 313 aaKnown RBP3.17□□□□□ -1.9
PHC3-213ENST00000491258 EPHA8P29322 1005 aaPredicted RBP3.17□□□□□ -1.9
PHC3-213ENST00000491258 ICAM3P32942 547 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 NF2P35240 595 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 GYG1P46976 350 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 TFAP4Q01664 338 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 PRKCZQ05513 592 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 GAGE2BQ13066 116 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 RABL6Q3YEC7 729 aaPredicted RBP3.17□□□□□ -1.9
PHC3-213ENST00000491258 GAGE2EQ4V326 116 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 GAGE2AQ6NT46 116 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 APOBEC3FQ8IUX4 373 aaKnown RBP3.17□□□□□ -1.9
PHC3-213ENST00000491258 Q8N7P7 452 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 ARSGQ96EG1 525 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 UBXN10Q96LJ8 280 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 SGK494Q96LW2 274 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 PRICKLE1Q96MT3 831 aaPredicted RBP3.17□□□□□ -1.9
PHC3-213ENST00000491258 GAL3ST4Q96RP7 486 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 MAP7D2Q96T17 732 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 TRMT1Q9NXH9 659 aaKnown RBP3.17□□□□□ -1.9
PHC3-213ENST00000491258 GAGE2DQ9UEU5 116 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 RGPD2P0DJD1 1756 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 FAM205AQ6ZU69 1335 aa3.17□□□□□ -1.9
PHC3-213ENST00000491258 KIF20BQ96Q89 1820 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 KIAA1551Q9HCM1 1747 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 NRXN2Q9P2S2 1712 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 CCDC196A0A1B0GTZ2 297 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 SRRM5B3KS81 715 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 IFRD1O00458 451 aaPredicted RBP3.16□□□□□ -1.9
PHC3-213ENST00000491258 PHOX2AO14813 284 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 NDUFS3O75489 264 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 HPRP00739 348 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 HIST1H2ABP04908 130 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 HIST1H2ADP20671 130 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 PLA2G7Q13093 441 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 KCNC3Q14003 757 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 PKN2Q16513 984 aaKnown RBP3.16□□□□□ -1.9
PHC3-213ENST00000491258 C15orf32Q32M92 178 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 GCNT6Q5T4J0 391 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 APOBEC3HQ6NTF7 200 aaKnown RBP3.16□□□□□ -1.9
PHC3-213ENST00000491258 HIST3H2AQ7L7L0 130 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 TRPC4APQ8TEL6 797 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 SGCDQ92629 289 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 CYYR1Q96J86 154 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 NUDCD1Q96RS6 583 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 RTN4RQ9BZR6 473 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 KAT14Q9H8E8 782 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 A4GALTQ9NPC4 353 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 KMT2BQ9UMN6 2715 aaPredicted RBP3.16□□□□□ -1.9
PHC3-213ENST00000491258 ATRXP46100 2492 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 MYH14Q7Z406 1995 aaKnown RBP3.16□□□□□ -1.9
PHC3-213ENST00000491258 MROH5Q6ZUA9 1318 aa3.16□□□□□ -1.9
PHC3-213ENST00000491258 A0A1W2PN81 502 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 A0A1W2PQF6 199 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 TMEM8BA6NDV4 472 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 TCP10L2B9ZVM9 353 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 E9PI62 339 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 HCRTR2O43614 444 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 CA4P22748 312 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 CHRNA7P36544 502 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 GPR143P51810 404 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 RPL7AP62424 266 aaKnown RBP3.15□□□□□ -1.91
PHC3-213ENST00000491258 DLK1P80370 383 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 ZFP36L1Q07352 338 aaKnown RBP3.15□□□□□ -1.91
PHC3-213ENST00000491258 ALDH1L2Q3SY69 923 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 MOGAT2Q3SYC2 334 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 CAVIN4Q5BKX8 364 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 TSPAN33Q86UF1 283 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 TICAM1Q8IUC6 712 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 TMEM116Q8NCL8 245 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 SMAP2Q8WU79 429 aaPredicted RBP3.15□□□□□ -1.91
PHC3-213ENST00000491258 ST8SIA4Q92187 359 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 HTRA1Q92743 480 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 SCLT1Q96NL6 688 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 TDRD3Q9H7E2 651 aaKnown RBP3.15□□□□□ -1.91
PHC3-213ENST00000491258 TEX10Q9NXF1 929 aaPredicted RBP3.15□□□□□ -1.91
PHC3-213ENST00000491258 DGKBQ9Y6T7 804 aa3.15□□□□□ -1.91
PHC3-213ENST00000491258 COL5A3P25940 1745 aaPredicted RBP3.15□□□□□ -1.91
PHC3-213ENST00000491258 TUBGCP6Q96RT7 1819 aa3.14□□□□□ -1.91
PHC3-213ENST00000491258 DUOX1Q9NRD9 1551 aa3.14□□□□□ -1.91
PHC3-213ENST00000491258 ELOVL7A1L3X0 281 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms