RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 LOC102723996A0A087X1L8 192 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 A0A0J9YVX5 310 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 OR51F1A6NGY5 319 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 RASGRF2O14827 1237 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 FFAR3O14843 346 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 GPR42O15529 346 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 OR1I1O60431 355 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 MBD3O95983 291 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 RPN2P04844 631 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 TPH1P17752 444 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 CCR7P32248 378 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 FOXN2P32314 431 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 AP2B1P63010 937 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 CSNK1G2P78368 415 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 ZNF33BQ06732 778 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 POU6F1Q14863 301 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 TCEAL1Q15170 157 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 LONRF1Q17RB8 773 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 MUM1Q2TAK8 710 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 ZNF766Q5HY98 468 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 MEX3BQ6ZN04 569 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 NEK10Q6ZWH5 1172 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 RNF44Q7L0R7 432 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 CFAP61Q8NHU2 1237 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 GPR137Q96N19 417 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 SPATA13Q96N96 652 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 GBP4Q96PP9 640 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 PPP1R2P1Q96PQ5 205 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 FERMT1Q9BQL6 677 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 HEMGNQ9BXL5 484 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 ZNF700Q9H0M5 742 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 C14orf105Q9NVL8 296 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 STMN3Q9NZ72 180 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 ALG6Q9Y672 507 aa12.96□□□□□ -0.33
CTDSP1-210ENST00000491064 FAM227AF5H4B4 570 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 GPC4O75487 556 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 STK10O94804 968 aaKnown RBP12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 EIF2S1P05198 315 aaKnown RBP12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 HEXBP07686 556 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 ICAM2P13598 275 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 HOXB4P17483 251 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 PSMA3P25788 255 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 PSMB5P28074 263 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 HSPA14Q0VDF9 509 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 DSG2Q14126 1118 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 PRTGQ2VWP7 1150 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 KRTCAP3Q53RY4 240 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 KCTD11Q693B1 232 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 UNC5DQ6UXZ4 953 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 CDKL3Q8IVW4 592 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 ACTL9Q8TC94 416 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 LRRC45Q96CN5 670 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 IMMP1LQ96LU5 166 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 DNAJC7Q99615 494 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 MIPEPQ99797 713 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 TSPAN10Q9H1Z9 355 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 TRPC4Q9UBN4 977 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 TEKT2Q9UIF3 430 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 SLC39A10Q9ULF5 831 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.345e-7■■■□□ 16
CTDSP1-210ENST00000491064 HCFC1P51610 2035 aa12.95□□□□□ -0.34
CTDSP1-210ENST00000491064 CCDC162PA2VCL2 907 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 MROH6A6NGR9 719 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 FANCGO15287 622 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 NADKO95544 446 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 ERVK-10P10266 1014 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 RBP3P10745 1247 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 SLC26A3P40879 764 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 EFNA3P52797 238 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 ART1P52961 327 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 CCDC181Q5TID7 509 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 TMEM205Q6UW68 189 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 LUZP1Q86V48 1076 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 AMER3Q8N944 861 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 OR2L3Q8NG85 312 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 OR8K1Q8NGG5 319 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 LKAAEAR1Q8TD35 194 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 PHF10Q8WUB8 498 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 ASZ1Q8WWH4 475 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 MVB12AQ96EY5 273 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 CABS1Q96KC9 395 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 ALS2CR12Q96Q35 445 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 CHP1Q99653 195 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 TUBB6Q9BUF5 446 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 YIPF2Q9BWQ6 316 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 RAB11FIP5Q9BXF6 653 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 TGIF2Q9GZN2 237 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 PIH1D1Q9NWS0 290 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 CDC14AQ9UNH5 594 aa12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 PRRC2AP48634 2157 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-210ENST00000491064 AKAP6Q13023 2319 aa12.93□□□□□ -0.34
CTDSP1-210ENST00000491064 MACROD2A1Z1Q3 448 aa12.93□□□□□ -0.34
CTDSP1-210ENST00000491064 ASPDHA6ND91 283 aa12.93□□□□□ -0.34
CTDSP1-210ENST00000491064 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
CTDSP1-210ENST00000491064 NPIPA5E9PKD4 350 aa12.93□□□□□ -0.34
CTDSP1-210ENST00000491064 F8W8V4 182 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms