RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 GPRIN3Q6ZVF9 776 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 SPRED1Q7Z699 444 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 CRLF3Q8IUI8 442 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 PLXDC1Q8IUK5 500 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 TBC1D19Q8N5T2 526 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 JPH3Q8WXH2 748 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 UBE2E3Q969T4 207 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 ESAMQ96AP7 390 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 WDR34Q96EX3 536 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 FAR2Q96K12 515 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 EFCAB11Q9BUY7 163 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 ILKAPQ9H0C8 392 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 ACTR8Q9H981 624 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 MRPS30Q9NP92 439 aaKnown RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 SEMA4BQ9NPR2 832 aaPredicted RBP12.78□□□□□ -0.36
SNX12-205ENST00000490561 TAC3Q9UHF0 121 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 TRPS1Q9UHF7 1281 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 HAO1Q9UJM8 370 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 POMT2Q9UKY4 750 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 RAP2CQ9Y3L5 183 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 ASB1Q9Y576 335 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 U3KQA8 63 aa12.78□□□□□ -0.36
SNX12-205ENST00000490561 ARHGEF17Q96PE2 2063 aaPredicted RBP12.77□□□□□ -0.36
SNX12-205ENST00000490561 A0A0J9YY10 115 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 CPED1A4D0V7 1026 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 C4orf47A7E2U8 309 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 ESRRBO95718 433 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 UGT2B7P16662 529 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 GRK3P35626 688 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 ARL1P40616 181 aaPredicted RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 CCR8P51685 355 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 CDH13P55290 713 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 OCRLQ01968 901 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 IRF8Q02556 426 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 ILKQ13418 452 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 E2F2Q14209 437 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 HIST2H2ACQ16777 129 aaPredicted RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 XKR6Q5GH73 641 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 ARL13AQ5H913 290 aaPredicted RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 HIST2H2AA3Q6FI13 130 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 GUSBP11Q6P575 273 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 WDR74Q6RFH5 385 aaPredicted RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 NXPE4Q6UWF7 544 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 MILR1Q7Z6M3 343 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 CUZD1Q86UP6 607 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 ZNF761Q86XN6 746 aaPredicted RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 KRT78Q8N1N4 520 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 C2orf73Q8N5S3 287 aaPredicted RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 L3MBTL4Q8NA19 623 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 ABHD11Q8NFV4 315 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 OR2L3Q8NG85 312 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 OR2A1Q8NGT9 310 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 BAHD1Q8TBE0 780 aaPredicted RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 IFI44Q8TCB0 444 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 AGAP11Q8TF27 550 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 RSC1A1Q92681 617 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 REPS1Q96D71 796 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 PTCD3Q96EY7 689 aaKnown RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 NSUN5Q96P11 429 aaKnown RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 OR4K3Q96R72 315 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 SLC29A3Q9BZD2 475 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 NSRP1Q9H0G5 558 aaKnown RBP12.77□□□□□ -0.37
SNX12-205ENST00000490561 ZBTB26Q9HCK0 441 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 MID1IP1Q9NPA3 183 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 PFDN4Q9NQP4 134 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 ABCF3Q9NUQ8 709 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 TMEM184CQ9NVA4 438 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 SNX7Q9UNH6 387 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 BTBD3Q9Y2F9 522 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 KLK4Q9Y5K2 254 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 RALGAPA1Q6GYQ0 2036 aa12.77□□□□□ -0.37
SNX12-205ENST00000490561 TCP11X1B4DZS4 312 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 SLCO1B7G3V0H7 640 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 OR7A17O14581 309 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 MAP3K7O43318 606 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 TNFSF14O43557 240 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 CHEK2O96017 543 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 FGF4P08620 206 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 VIMP08670 466 aaKnown RBP12.76□□□□□ -0.37
SNX12-205ENST00000490561 C1GALT1C1LP0DN25 315 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 UROSP10746 265 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 HGFP14210 728 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 JUPP14923 745 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 TYRP1P17643 537 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 GSTM2P28161 218 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 PRDX3P30048 256 aaKnown RBP12.76□□□□□ -0.37
SNX12-205ENST00000490561 PEBP1P30086 187 aaKnown RBP12.76□□□□□ -0.37
SNX12-205ENST00000490561 SERPINB1P30740 379 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 OR1D5P58170 312 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 GNGT1P63211 74 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 RELAQ04206 551 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 ZNF33BQ06732 778 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 TRAF3Q13114 568 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 CHIT1Q13231 466 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 STPG1Q5TH74 334 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 GRHL2Q6ISB3 625 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 SLCO4C1Q6ZQN7 724 aa12.76□□□□□ -0.37
SNX12-205ENST00000490561 TMPRSS11BQ86T26 416 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms