RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 RMDN2Q96LZ7 410 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 NAA11Q9BSU3 229 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 ANKRD2Q9GZV1 360 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 ATAD3AQ9NVI7 634 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 C5AR2Q9P296 337 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 WDR83OSQ9Y284 106 aa4.34□□□□□ -1.71
HMGB1P38-201ENST00000490557 MEIOCA2RUB1 952 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 NR5A2O00482 541 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 GAS8-AS1O95177 125 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 GPIP06744 558 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 EPCAMP16422 314 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 CYP11B2P19099 503 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 OAS2P29728 719 aaKnown RBP4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 MZT1Q08AG7 82 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 NPTX1Q15818 432 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 SLC25A53Q5H9E4 307 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 PSRC1Q6PGN9 363 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 PPP1R21Q6ZMI0 780 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 Q6ZSR9 355 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 SNX32Q86XE0 403 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 NKAIN3Q8N8D7 197 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 IQUBQ8NA54 791 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 OR2T6Q8NHC8 308 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 KIF18AQ8NI77 898 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 VANGL1Q8TAA9 524 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 RSPH1Q8WYR4 309 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 EXT2Q93063 718 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 LRRC3BQ96PB8 259 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 EGFL8Q99944 293 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 FUCA2Q9BTY2 467 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 GTPBP2Q9BX10 602 aaKnown RBP4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 GSN-AS1Q9NRJ2 163 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 MAN1B1Q9UKM7 699 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 CHKBQ9Y259 395 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 WDR37Q9Y2I8 494 aa4.33□□□□□ -1.72
HMGB1P38-201ENST00000490557 DISP3Q9P2K9 1392 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 EXTL3O43909 919 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 SNX3O60493 162 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 GLRA3O75311 464 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 CDK2AP2O75956 126 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 CSN3P07498 182 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 PRKAR1AP10644 381 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 ZNF26P17031 533 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 CEBPBP17676 345 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 LHCGRP22888 699 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 HSD17B3P37058 310 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 PPARDQ03181 441 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 TMEM187Q14656 261 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 PSMD6Q15008 389 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 OR4A47Q6IF82 309 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 BHLHB9Q6PI77 547 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 ENPP7Q6UWV6 458 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 TMEM207Q6UWW9 146 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 ERN2Q76MJ5 926 aaKnown RBP4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 RASGEF1AQ8N9B8 481 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 SIPA1Q96FS4 1042 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 CDHR1Q96JP9 859 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 RAB3IPQ96QF0 476 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 FN3KQ9H479 309 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 TLE6Q9H808 572 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 POLLQ9UGP5 575 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 R4GN57 208 aa4.32□□□□□ -1.72
HMGB1P38-201ENST00000490557 TSPY2A6NKD2 308 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 RECQL5O94762 991 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 DDHD2O94830 711 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 LUC7L3O95232 432 aaKnown RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 PENKP01210 267 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 TSPY3P0CV98 308 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 TSPY8P0CW00 308 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 SP100P23497 879 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 CTNNA1P35221 906 aaKnown RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 NKX2-1P43699 371 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 SLC6A12P48065 614 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 VAMP7P51809 220 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 MYL7Q01449 175 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 TSPY1Q01534 308 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 ROR1Q01973 937 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 GCNT1Q02742 428 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 ILF2Q12905 390 aaKnown RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 TRAP1Q12931 704 aaKnown RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 HYAL4Q2M3T9 481 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 XKR3Q5GH77 459 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 ADAMTSL4-AS1Q5T5F5 129 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 CASC1Q6TDU7 716 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 C11orf57Q6ZUT1 292 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 SLFN11Q7Z7L1 901 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 HOGA1Q86XE5 327 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 LACC1Q8IV20 430 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 BMPERQ8N8U9 685 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 OR5AP2Q8NGF4 316 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 ZMAT2Q96NC0 199 aaKnown RBP4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 GBP5Q96PP8 586 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 SPAG5Q96R06 1193 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 SYT15Q9BQS2 421 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 CLEC7AQ9BXN2 247 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 SLC2A11Q9BYW1 496 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 SNX25Q9H3E2 840 aa4.31□□□□□ -1.72
HMGB1P38-201ENST00000490557 PLCXD1Q9NUJ7 323 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms