RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 PLTPP55058 493 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 VSX2P58304 361 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 GPX6P59796 221 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 CALCOCO2Q13137 446 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 STRA8Q7Z7C7 330 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 ZC3HC1Q86WB0 502 aaKnown RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 BBOF1Q8ND07 529 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 FBXO25Q8TCJ0 367 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 MCMBPQ9BTE3 642 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 LRRC1Q9BTT6 524 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 NLNQ9BYT8 704 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 INTS7Q9NVH2 962 aaKnown RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 CUEDC1Q9NWM3 386 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 GEMIN8Q9NWZ8 242 aaKnown RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 ZFATQ9P243 1243 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 TCFL5Q9UL49 500 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 SH2B3Q9UQQ2 575 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 VWA7Q9Y334 891 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 AP1M2Q9Y6Q5 423 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 GCN1Q92616 2671 aaKnown RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 K7EM74 188 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 EIF3FO00303 357 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-214ENST00000490398 DNAJB5O75953 348 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 SAT1P21673 171 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 CMPK1P30085 196 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 TAS2R39P59534 338 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 C19orf57Q0VDD7 668 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 NFATC3Q12968 1075 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 CHAF1BQ13112 559 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 KCNAB2Q13303 367 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 ARHGAP19Q14CB8 494 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 NCF4Q15080 339 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 UGT8Q16880 541 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 MLIPQ5VWP3 458 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 ICE2Q659A1 982 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 CPZQ66K79 652 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 FAM45BPQ6NSW5 357 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 UGT3A1Q6NUS8 523 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 TLDC1Q6P9B6 456 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 TTLL10Q6ZVT0 673 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 RNF44Q7L0R7 432 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 SYVN1Q86TM6 617 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 PAQR7Q86WK9 346 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 PLD3Q8IV08 490 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 METTL27Q8N6F8 245 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-214ENST00000490398 FAM45AQ8TCE6 357 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 ADAMTS17Q8TE56 1095 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 PYROXD1Q8WU10 500 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 ZNF592Q92610 1267 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 SELENOSQ9BQE4 189 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 TRIM55Q9BYV6 548 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 SNX7Q9UNH6 387 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 FER1L5A0AVI2 2057 aa17.36■□□□□ 0.37
COL9A3-214ENST00000490398 KLF7O75840 302 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 FKBP9O95302 570 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 HBQ1P09105 142 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 ALAS2P22557 587 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 RGS4P49798 205 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 SNRPNP63162 240 aaKnown RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 PRDX1Q06830 199 aaKnown RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 PDAP1Q13442 181 aaKnown RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 ZC3H12BQ5HYM0 836 aaKnown RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 WASHC2DQ5SRD0 308 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 ZNF425Q6IV72 752 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 CEP97Q8IW35 865 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 MYO1HQ8N1T3 1032 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 GABPB2Q8TAK5 448 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 APOBEC4Q8WW27 367 aaKnown RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 PLCD4Q9BRC7 762 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 NDC1Q9BTX1 674 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 ATG10Q9H0Y0 220 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 MRPS30Q9NP92 439 aaKnown RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 POLHQ9Y253 713 aa17.35■□□□□ 0.37
COL9A3-214ENST00000490398 UTP11Q9Y3A2 253 aaKnown RBP17.35■□□□□ 0.37
COL9A3-214ENST00000490398 FAM95CA0A1B0GW59 222 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 FITM1A5D6W6 292 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 RECKO95980 971 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 NR1D1P20393 614 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 AGXTP21549 392 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 HSD17B2P37059 387 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 TBPL1P62380 186 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 DCDP81605 110 aaKnown RBP17.34■□□□□ 0.37
COL9A3-214ENST00000490398 NKAIN1Q4KMZ8 207 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 UBAP2Q5T6F2 1119 aaKnown RBP17.34■□□□□ 0.37
COL9A3-214ENST00000490398 COX15Q7KZN9 410 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 SLC26A11Q86WA9 606 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 CCDC25Q86WR0 208 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 PALM2Q8IXS6 379 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 NOA1Q8NC60 698 aaKnown RBP17.34■□□□□ 0.37
COL9A3-214ENST00000490398 ANKRD49Q8WVL7 239 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 PARVBQ9HBI1 364 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 ZNF71Q9NQZ8 489 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-214ENST00000490398 ENAMQ9NRM1 1142 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 CUTCQ9NTM9 273 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 TXLNGQ9NUQ3 528 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 NDOR1Q9UHB4 597 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 CORO1CQ9ULV4 474 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-214ENST00000490398 MAN2B2Q9Y2E5 1009 aa17.34■□□□□ 0.37
COL9A3-214ENST00000490398 MTO1Q9Y2Z2 717 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms