RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 PTCHD3Q3KNS1 767 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 FIGLAQ6QHK4 219 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 LRIG3Q6UXM1 1119 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 CROCCP2Q86T23 111 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 TRIM73Q86UV7 250 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 TAX1BP1Q86VP1 789 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 TMEM151AQ8N4L1 468 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 DNAJC22Q8N4W6 341 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 PPFIBP2Q8ND30 876 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 ZNF578Q96N58 590 aaPredicted RBP16.78■□□□□ 0.28
ERCC3-207ENST00000490062 MRPL57Q9BQC6 102 aaKnown RBP16.78■□□□□ 0.28
ERCC3-207ENST00000490062 ASPSCR1Q9BZE9 553 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 UNKQ9C0B0 810 aaKnown RBP16.78■□□□□ 0.28
ERCC3-207ENST00000490062 ATG10Q9H0Y0 220 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 CNOT10Q9H9A5 744 aaKnown RBP16.78■□□□□ 0.28
ERCC3-207ENST00000490062 MKS1Q9NXB0 559 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 TBK1Q9UHD2 729 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 TAC3Q9UHF0 121 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 TMCO1Q9UM00 188 aa16.78■□□□□ 0.28
ERCC3-207ENST00000490062 IGKV1-8A0A0C4DH67 115 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 PMS2P1A4D2B8 440 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.77■□□□□ 0.28
ERCC3-207ENST00000490062 H3BMH7 237 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 MAP2K7O14733 419 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 TAPBPO15533 448 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 MAP3K7O43318 606 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 TNFSF15O95150 251 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 MT-ND3P03897 115 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 HGFP14210 728 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 FOLR1P15328 257 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 ITIH1P19827 911 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 RBMS1P29558 406 aaKnown RBP16.77■□□□□ 0.28
ERCC3-207ENST00000490062 ARL4DP49703 201 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 SH3BP2P78314 561 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 SLC18A2Q05940 514 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 PCDH1Q08174 1060 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 ZNF844Q08AG5 666 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.77■□□□□ 0.28
ERCC3-207ENST00000490062 FCRL6Q6DN72 434 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 CEACAM20Q6UY09 585 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 CDHR3Q6ZTQ4 885 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 RNF44Q7L0R7 432 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 FAM129CQ86XR2 697 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 ABHD11Q8NFV4 315 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 ZNF501Q96CX3 271 aaPredicted RBP16.77■□□□□ 0.28
ERCC3-207ENST00000490062 ZNF285Q96NJ3 590 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 OR4K3Q96R72 315 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 EGFL8Q99944 293 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 PLCD4Q9BRC7 762 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 TMEM79Q9BSE2 394 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 SARGQ9BW04 601 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 SPRY4Q9C004 299 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 MRPL46Q9H2W6 279 aaKnown RBP16.77■□□□□ 0.28
ERCC3-207ENST00000490062 FAM60AQ9NP50 221 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 SLC6A20Q9NP91 592 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 MRPS30Q9NP92 439 aaKnown RBP16.77■□□□□ 0.28
ERCC3-207ENST00000490062 THSD1Q9NS62 852 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 FGF21Q9NSA1 209 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 TMEM184CQ9NVA4 438 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 PISDQ9UG56 409 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 DCDC2Q9UHG0 476 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 PILRAQ9UKJ1 303 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 SNX7Q9UNH6 387 aa16.77■□□□□ 0.28
ERCC3-207ENST00000490062 A0A1W2PPM1 405 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 TMEM8BA6NDV4 472 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 C9orf172C9J069 976 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 POLR1CO15160 346 aaPredicted RBP16.76■□□□□ 0.27
ERCC3-207ENST00000490062 BRINP1O60477 761 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 EBLN1P0CF75 366 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 KRT15P19012 456 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 E2F2Q14209 437 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 TBC1D25Q3MII6 688 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 TNFAIP8L3Q5GJ75 292 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 ZC3H12BQ5HYM0 836 aaKnown RBP16.76■□□□□ 0.27
ERCC3-207ENST00000490062 DCAF12Q5T6F0 453 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 TMEM164Q5U3C3 297 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 TRABD2AQ86V40 505 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 PAQR7Q86WK9 346 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 OR4K1Q8NGD4 311 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 TSNARE1Q96NA8 513 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 DPH7Q9BTV6 452 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 PCMTD2Q9NV79 361 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 ZNF358Q9NW07 568 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 SOHLH2Q9NX45 425 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 SLC39A1Q9NY26 324 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 GPRC5BQ9NZH0 403 aa16.76■□□□□ 0.27
ERCC3-207ENST00000490062 UBXN8O00124 270 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 GLRA3O75311 464 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 SBK3P0C264 359 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 PYGBP11216 843 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 H2AFXP16104 143 aaPredicted RBP16.75■□□□□ 0.27
ERCC3-207ENST00000490062 CRHR1P34998 444 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 GLRBP48167 497 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 ALDH18A1P54886 795 aaKnown RBP16.75■□□□□ 0.27
ERCC3-207ENST00000490062 YBX1P67809 324 aaKnown RBP16.75■□□□□ 0.27
ERCC3-207ENST00000490062 TUBB3Q13509 450 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 SETDB1Q15047 1291 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 PCBP2Q15366 365 aaKnown RBP eCLIP16.75■□□□□ 0.27
ERCC3-207ENST00000490062 LRRC70Q7Z2Q7 622 aa16.75■□□□□ 0.27
ERCC3-207ENST00000490062 THOC6Q86W42 341 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms