RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 PTERQ96BW5 349 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 IP6K3Q96PC2 410 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 CUTCQ9NTM9 273 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 ABCF3Q9NUQ8 709 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 ANAPC2Q9UJX6 822 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 TP53TG5Q9Y2B4 290 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 TEX264Q9Y6I9 313 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
ABCF3-217ENST00000489719 ZNF462Q96JM2 2506 aa17.08■□□□□ 0.33
ABCF3-217ENST00000489719 A0A1B0GX78 115 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 E7ENX8 843 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 PEX12O00623 359 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 KLF7O75840 302 aaPredicted RBP17.08■□□□□ 0.32
ABCF3-217ENST00000489719 DNAJB5O75953 348 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 FOLR3P41439 243 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 RRADP55042 308 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 TAP2Q03519 686 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 PDIA2Q13087 525 aaKnown RBP17.08■□□□□ 0.32
ABCF3-217ENST00000489719 SLC9A5Q14940 896 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 PAQR3Q6TCH7 311 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 MED25Q71SY5 747 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 PIWIL4Q7Z3Z4 852 aaKnown RBP17.08■□□□□ 0.32
ABCF3-217ENST00000489719 GALNT7Q86SF2 657 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 ANKMY2Q8IV38 441 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 MYO1HQ8N1T3 1032 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 TMEM102Q8N9M5 508 aaPredicted RBP17.08■□□□□ 0.32
ABCF3-217ENST00000489719 PPFIBP2Q8ND30 876 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 ZNF480Q8WV37 535 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 ZNF285Q96NJ3 590 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 ZFYVE21Q9BQ24 234 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 PLCD4Q9BRC7 762 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 SLC25A23Q9BV35 468 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 TRIM55Q9BYV6 548 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 ANKMY1Q9P2S6 941 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 TAC3Q9UHF0 121 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 G3BP2Q9UN86 482 aaKnown RBP17.08■□□□□ 0.32
ABCF3-217ENST00000489719 VWA7Q9Y334 891 aa17.08■□□□□ 0.32
ABCF3-217ENST00000489719 COL6A6A6NMZ7 2263 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 HYKKA2RU49 373 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 OR2A25A4D2G3 310 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 FAM187AA6NFU0 413 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 DSCR3O14972 297 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 C8GP07360 202 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 HIST1H2AGP0C0S8 130 aaPredicted RBP17.07■□□□□ 0.32
ABCF3-217ENST00000489719 HIST1H2ADP20671 130 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 RPL21P46778 160 aaKnown RBP17.07■□□□□ 0.32
ABCF3-217ENST00000489719 CDKN2DP55273 166 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 ETF1P62495 437 aaKnown RBP17.07■□□□□ 0.32
ABCF3-217ENST00000489719 YBX1P67809 324 aaKnown RBP17.07■□□□□ 0.32
ABCF3-217ENST00000489719 ABATP80404 500 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 CHAF1BQ13112 559 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 PDAP1Q13442 181 aaKnown RBP17.07■□□□□ 0.32
ABCF3-217ENST00000489719 ICE2Q659A1 982 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 CPZQ66K79 652 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 FRMPD2BQ6IN97 320 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 OVCH1Q7RTY7 1134 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 SPNS2Q8IVW8 549 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 GPATCH11Q8N954 259 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 SPATA4Q8NEY3 305 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 OR2Y1Q8NGV0 311 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 CCDC138Q96M89 665 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 PARVBQ9HBI1 364 aa17.07■□□□□ 0.32
ABCF3-217ENST00000489719 LOC105369274A0A096LPK9 316 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 LOC102723532A0A0G2JNH3 316 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 FITM1A5D6W6 292 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 PABPN1LA6NDY0 278 aaKnown RBP17.06■□□□□ 0.32
ABCF3-217ENST00000489719 SLC16A5O15375 505 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 IGHEP01854 428 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 ALBP02768 609 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 GCGRP47871 477 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 IL2P60568 153 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 MRPS25P82663 173 aaKnown RBP17.06■□□□□ 0.32
ABCF3-217ENST00000489719 TIAL1Q01085 375 aaKnown RBP eCLIP17.06■□□□□ 0.32
ABCF3-217ENST00000489719 KCNC4Q03721 635 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 MGAT5Q09328 741 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 KLRB1Q12918 225 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 CALCOCO2Q13137 446 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 FRG1Q14331 258 aaKnown RBP17.06■□□□□ 0.32
ABCF3-217ENST00000489719 RBM20Q5T481 1227 aaKnown RBP17.06■□□□□ 0.32
ABCF3-217ENST00000489719 HECTD2Q5U5R9 776 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 STEAP4Q687X5 459 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 MRPL14Q6P1L8 145 aaKnown RBP17.06■□□□□ 0.32
ABCF3-217ENST00000489719 TRMT10BQ6PF06 316 aaKnown RBP17.06■□□□□ 0.32
ABCF3-217ENST00000489719 RNF44Q7L0R7 432 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 ADCK2Q7Z695 626 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 OR4N4Q8N0Y3 316 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 FBXO36Q8NEA4 188 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 FER1L6-AS2Q96M78 137 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 ERP44Q9BS26 406 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 SLC6A20Q9NP91 592 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 ENAMQ9NRM1 1142 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 ZFATQ9P243 1243 aa17.06■□□□□ 0.32
ABCF3-217ENST00000489719 CORO1CQ9ULV4 474 aaPredicted RBP17.06■□□□□ 0.32
ABCF3-217ENST00000489719 A6NL46 340 aa17.05■□□□□ 0.32
ABCF3-217ENST00000489719 H0YGG7 62 aa17.05■□□□□ 0.32
ABCF3-217ENST00000489719 PYCARD-AS1I3L0S3 204 aa17.05■□□□□ 0.32
ABCF3-217ENST00000489719 K7EM74 188 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms