RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 ZNF304Q9HCX3 659 aa15.18■□□□□ 0.02
ERGIC3-217ENST00000488935 INTS7Q9NVH2 962 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-217ENST00000488935 GNPTGQ9UJJ9 305 aa15.18■□□□□ 0.02
ERGIC3-217ENST00000488935 DOPEY1Q5JWR5 2465 aa15.18■□□□□ 0.02
ERGIC3-217ENST00000488935 LRRTM2O43300 516 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 IGHEP01854 428 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 ALBP02768 609 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 VARSP26640 1264 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 PPARGP37231 505 aaPredicted RBP15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 TTPAP49638 278 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 VPS41P49754 854 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 ST13P50502 369 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 EEF1A2Q05639 463 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 CDC16Q13042 620 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 ACSBG2Q5FVE4 666 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 AARS2Q5JTZ9 985 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 TCTE1Q5JU00 501 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 TTC23LQ6PF05 361 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 NLRP9Q7RTR0 991 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 STT3BQ8TCJ2 826 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 TM9SF4Q92544 642 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 ZUFSPQ96AP4 578 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 C10orf90Q96M02 699 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 SLC30A3Q99726 388 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 DPH7Q9BTV6 452 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 LHPPQ9H008 270 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 C3orf18Q9UK00 162 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 SCN2AQ99250 2005 aa15.17■□□□□ 0.02
ERGIC3-217ENST00000488935 CELSR2Q9HCU4 2923 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 FITM1A5D6W6 292 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 VSTM2BA6NLU5 285 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 F8W8V4 182 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 H0YGG7 62 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 E2F3O00716 465 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 IPO13O94829 963 aaKnown RBP15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 ONECUT2O95948 504 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 ZGLP1P0C6A0 271 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 PIM1P11309 404 aaPredicted RBP15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 ARF3P61204 181 aaPredicted RBP15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 RPS6KA1Q15418 735 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 SYT16Q17RD7 645 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 HKDC1Q2TB90 917 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 GSTA5Q7RTV2 222 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 PLD3Q8IV08 490 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 SIRT6Q8N6T7 355 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 MIEF2Q96C03 454 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 PANX3Q96QZ0 392 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 BARD1Q99728 777 aaKnown RBP15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 SLC26A1Q9H2B4 701 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 WDR54Q9H977 334 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 PTGFRNQ9P2B2 879 aa15.16■□□□□ 0.02
ERGIC3-217ENST00000488935 IGKV1-8A0A0C4DH67 115 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 ARHGEF33A8MVX0 844 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 CHRM3P20309 590 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 RPS3P23396 243 aaKnown RBP eCLIP15.15■□□□□ 0.021e-7■■■□□ 16.7
ERGIC3-217ENST00000488935 KCNJ11Q14654 390 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 ZNF169Q14929 603 aaPredicted RBP15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 FAM214AQ32MH5 1076 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 MEI1Q5TIA1 1274 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 IRAK1BP1Q5VVH5 260 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 RNF10Q8N5U6 811 aaKnown RBP15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 OR1N1Q8NGS0 311 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 PPP4R1Q8TF05 950 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 LPGAT1Q92604 370 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 CABS1Q96KC9 395 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 MAGEB10Q96LZ2 347 aaPredicted RBP15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 PKP4Q99569 1192 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 BFARQ9NZS9 450 aa15.15■□□□□ 0.02
ERGIC3-217ENST00000488935 TARM1B6A8C7 271 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 SRPX2O60687 465 aaPredicted RBP15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 ERVK-10P10266 1014 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 ACPPP15309 386 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 FBLP22087 321 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 CXCR5P32302 372 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 NPY2RP49146 381 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 EFNA3P52797 238 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 MAT1AQ00266 395 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 OCA2Q04671 838 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 CUL1Q13616 776 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 CCNG2Q16589 344 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 KLHL38Q2WGJ6 581 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 ANKRD22Q5VYY1 191 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 B3GNTL1Q67FW5 361 aaPredicted RBP15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 IGFL2Q6UWQ7 119 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 RNF44Q7L0R7 432 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 ST6GALNAC3Q8NDV1 305 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 OR9A1PQ8NGU1 263 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 BRIX1Q8TDN6 353 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 FOPNLQ96NB1 174 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 MACROD1Q9BQ69 325 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 FRMD8P1Q9BZ68 369 aaPredicted RBP15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 IL22Q9GZX6 179 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 MRPS30Q9NP92 439 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 LZTFL1Q9NQ48 299 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 AGPAT4Q9NRZ5 378 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 SEMA3GQ9NS98 782 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 TRPC4Q9UBN4 977 aa15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 ZNF282Q9UDV7 671 aaPredicted RBP15.14■□□□□ 0.01
ERGIC3-217ENST00000488935 RUVBL1Q9Y265 456 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms