RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ZNF570Q96NI8 536 aa18.77■□□□□ 0.59
CCM2-216ENST00000488727 CNOT1A5YKK6 2376 aaKnown RBP18.76■□□□□ 0.59
CCM2-216ENST00000488727 TRPC5OSA6NMA1 111 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 A8MT66 165 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 IPO13O94829 963 aaKnown RBP18.76■□□□□ 0.59
CCM2-216ENST00000488727 CBSLP0DN79 551 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 ENO3P13929 434 aaPredicted RBP18.76■□□□□ 0.59
CCM2-216ENST00000488727 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
CCM2-216ENST00000488727 CBSP35520 551 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 SLC25A3Q00325 362 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 GPR18Q14330 331 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 MYLK4Q86YV6 388 aaPredicted RBP18.76■□□□□ 0.59
CCM2-216ENST00000488727 CCNYL1Q8N7R7 359 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 IFI44Q8TCB0 444 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 AGR3Q8TD06 166 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 ANKRD49Q8WVL7 239 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 NAT6Q93015 286 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 MOCOSQ96EN8 888 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 LINGO1Q96FE5 620 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 FERD3LQ96RJ6 166 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 DLL3Q9NYJ7 618 aa18.76■□□□□ 0.59
CCM2-216ENST00000488727 SPAARA0A1B0GVQ0 90 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 RHPN2P1A8MT19 583 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 EIF3FO00303 357 aaPredicted RBP18.75■□□□□ 0.59
CCM2-216ENST00000488727 ITGAXP20702 1163 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 PIK3R1P27986 724 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 VHLP40337 213 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 NOVA1P51513 510 aaKnown RBP18.75■□□□□ 0.59
CCM2-216ENST00000488727 NFKB2Q00653 900 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 BIRC2Q13490 618 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 NR1D2Q14995 579 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 SH2D4BQ5SQS7 431 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 NEK10Q6ZWH5 1172 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 AVL9Q8NBF6 648 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 OR6C4Q8NGE1 309 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 CLPTM1LQ96KA5 538 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 NUF2Q9BZD4 464 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 WDR55Q9H6Y2 383 aaPredicted RBP18.75■□□□□ 0.59
CCM2-216ENST00000488727 HEBP2Q9Y5Z4 205 aa18.75■□□□□ 0.59
CCM2-216ENST00000488727 DCDC2BA2VCK2 349 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 MPC1LP0DKB6 136 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 THRAP10827 490 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 CEACAM1P13688 526 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 IL2P60568 153 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 PRKG2Q13237 762 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 UNC5DQ6UXZ4 953 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 TMEM26Q6ZUK4 368 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 FRMD7Q6ZUT3 714 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 AFAP1L2Q8N4X5 818 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 OR5K2Q8NHB8 316 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 JPH3Q8WXH2 748 aaPredicted RBP18.74■□□□□ 0.59
CCM2-216ENST00000488727 L3HYPDHQ96EM0 354 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 NRTNQ99748 197 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 CCDC3Q9BQI4 270 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 HGH1Q9BTY7 390 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 TRMOQ9BU70 441 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 KIR3DX1Q9H7L2 352 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 MVB12BQ9H7P6 319 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 EML4Q9HC35 981 aaKnown RBP18.74■□□□□ 0.59
CCM2-216ENST00000488727 EVA1BQ9NVM1 165 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 GOLGA8QA0A0J9YX86 632 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 GOLGA8OA6NCC3 632 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 GOLGA8NF8WBI6 632 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 KCNK5O95279 499 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 PNLIPP16233 465 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 SDHBP21912 280 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 EPHA3P29320 983 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 BDKRB1P46663 353 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 RGS4P49798 205 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 TAF11Q15544 211 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 C1orf146Q5VVC0 180 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 SPRED1Q7Z699 444 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 RASGRP3Q8IV61 690 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 TBC1D21Q8IYX1 336 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 RP9Q8TA86 221 aaKnown RBP18.74■□□□□ 0.59
CCM2-216ENST00000488727 UNKQ9C0B0 810 aaKnown RBP18.74■□□□□ 0.59
CCM2-216ENST00000488727 TRIT1Q9H3H1 467 aaKnown RBP18.74■□□□□ 0.59
CCM2-216ENST00000488727 SYTL2Q9HCH5 934 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 ACSS2Q9NR19 701 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 MRGBPQ9NV56 204 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 IKZF3Q9UKT9 509 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 ANGPTL2Q9UKU9 493 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 COLEC10Q9Y6Z7 277 aa18.74■□□□□ 0.59
CCM2-216ENST00000488727 KRT87PA6NCN2 255 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 FKBP6O75344 327 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 PSIP1O75475 530 aaKnown RBP18.73■□□□□ 0.59
CCM2-216ENST00000488727 C1orf105O95561 183 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 GP1BAP07359 652 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 NDUFS1P28331 727 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 ALDH4A1P30038 563 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 OR1D5P58170 312 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 CUL3Q13618 768 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 KRT33BQ14525 404 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 CCSMST1Q4G0I0 132 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 AAGABQ6PD74 315 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 SLCO6A1Q86UG4 719 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 RBM12BQ8IXT5 1001 aaKnown RBP18.73■□□□□ 0.59
CCM2-216ENST00000488727 Q8N9G6 341 aaPredicted RBP18.73■□□□□ 0.59
CCM2-216ENST00000488727 ASB11Q8WXH4 323 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 DLG3Q92796 817 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms