RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 NRTNQ99748 197 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 MIPEPQ99797 713 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 HAUS8Q9BT25 410 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 STRADBQ9C0K7 418 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 KCNK9Q9NPC2 374 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 SPHK1Q9NYA1 384 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 TMEM216Q9P0N5 145 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 XPR1Q9UBH6 696 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 MID2Q9UJV3 735 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 CLCA2Q9UQC9 943 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 TNPO3Q9Y5L0 923 aaKnown RBP9.94□□□□□ -0.82
SKA1-204ENST00000488454 ACTL7BQ9Y614 415 aa9.94□□□□□ -0.82
SKA1-204ENST00000488454 GOLGA4Q13439 2230 aaKnown RBP9.93□□□□□ -0.82
SKA1-204ENST00000488454 IGHV5-10-1A0A0J9YXX1 117 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 TLCD2A6NGC4 264 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 D6RAR5 112 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 AGPSO00116 658 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 TOX3O15405 576 aaPredicted RBP9.93□□□□□ -0.82
SKA1-204ENST00000488454 STK16O75716 305 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 IPO13O94829 963 aaKnown RBP9.93□□□□□ -0.82
SKA1-204ENST00000488454 DKK1O94907 266 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 WDR47O94967 919 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 FKBP9O95302 570 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 MYL2P10916 166 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 UGT2B7P16662 529 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 CSF2RBP32927 897 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 CSTF2P33240 577 aaKnown RBP eCLIP9.93□□□□□ -0.82
SKA1-204ENST00000488454 SOX11P35716 441 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 ALDH18A1P54886 795 aaKnown RBP9.93□□□□□ -0.82
SKA1-204ENST00000488454 GFERP55789 205 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 ABATP80404 500 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 CFHR1Q03591 330 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 SLC5A12Q1EHB4 618 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 PTCHD3Q3KNS1 767 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 HES3Q5TGS1 186 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 AGBL2Q5U5Z8 902 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 SPESP1Q6UW49 350 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 CARFQ8N187 725 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 LMNTD1Q8N9Z9 388 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 PDPRQ8NCN5 879 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 OR56A3Q8NH54 315 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 ADAMTS14Q8WXS8 1223 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 PYCR2Q96C36 320 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 CCDC126Q96EE4 140 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 PHF21BQ96EK2 531 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 APOPT1Q96IL0 206 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 CCDC74BQ96LY2 380 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 OR2A14Q96R47 310 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 MAP3K3Q99759 626 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 ACAT2Q9BWD1 397 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 CAPS2Q9BXY5 557 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 CD244Q9BZW8 370 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 SEMA6CQ9H3T2 930 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 MRPS30Q9NP92 439 aaKnown RBP9.93□□□□□ -0.82
SKA1-204ENST00000488454 C1GALT1Q9NS00 363 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 MKS1Q9NXB0 559 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 PTBP2Q9UKA9 531 aaKnown RBP9.93□□□□□ -0.82
SKA1-204ENST00000488454 POMT2Q9UKY4 750 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 PLLPQ9Y342 182 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 DYRK1BQ9Y463 629 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 ANGPTL3Q9Y5C1 460 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 KCNE2Q9Y6J6 123 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 ZFC3H1O60293 1989 aaKnown RBP9.93□□□□□ -0.82
SKA1-204ENST00000488454 ZNF292O60281 2723 aa9.93□□□□□ -0.82
SKA1-204ENST00000488454 MN1Q10571 1320 aaPredicted RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 A0A0J9YY10 115 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 DYNC1I1O14576 645 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 ATP8B1O43520 1251 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 CCNT2O60583 730 aaKnown RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 CSO75390 466 aaKnown RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 WFS1O76024 890 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 ZBTB11O95625 1053 aaPredicted RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 C9P02748 559 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 CPA3P15088 417 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 ATP5F1P24539 256 aaPredicted RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 HRH2P25021 359 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 GGT5P36269 586 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 HSPA7P48741 367 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 SEPHS1P49903 392 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 MAGOHP61326 146 aaKnown RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 TBPL1P62380 186 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 PRDX1Q06830 199 aaKnown RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 ZFP36L1Q07352 338 aaKnown RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 GPS2Q13227 327 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 ISXQ2M1V0 245 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 TNFAIP8L3Q5GJ75 292 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 TMTC4Q5T4D3 741 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 PRAMEF13Q5VWM6 474 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 CDCP2Q5VXM1 449 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 ZNF574Q6ZN55 896 aaPredicted RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 CDHR3Q6ZTQ4 885 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 DGLUCYQ7Z3D6 616 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 THOC6Q86W42 341 aaKnown RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 C17orf64Q86WR6 236 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 KMT5CQ86Y97 462 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 SLC22A9Q8IVM8 553 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 CACTIN-AS1Q8N1I8 211 aa9.92□□□□□ -0.82
SKA1-204ENST00000488454 PTGR2Q8N8N7 351 aaPredicted RBP9.92□□□□□ -0.82
SKA1-204ENST00000488454 SNX31Q8N9S9 440 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms