RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 GRIA3P42263 894 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 CDKL1Q00532 357 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 CYP4F3Q08477 520 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 ZNF844Q08AG5 666 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 PTCHD3Q3KNS1 767 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 FCRL6Q6DN72 434 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 KLC3Q6P597 504 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 UNQ6494/PRO21346Q6UXR6 183 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 TIFABQ6ZNK6 161 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 KMT5CQ86Y97 462 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 CARFQ8N187 725 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 D2HGDHQ8N465 521 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 PDPRQ8NCN5 879 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 MYRIPQ8NFW9 859 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 OR56A3Q8NH54 315 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 ATL1Q8WXF7 558 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 USP7Q93009 1102 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 ESAMQ96AP7 390 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 RHBDF1Q96CC6 855 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 SCYL1Q96KG9 808 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 TSNARE1Q96NA8 513 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 OR4K3Q96R72 315 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 DPH7Q9BTV6 452 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 SGPP1Q9BX95 441 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 MRPS30Q9NP92 439 aaKnown RBP10.63□□□□□ -0.71
UBE4B-210ENST00000488228 SLC39A1Q9NY26 324 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 CPSF2Q9P2I0 782 aaKnown RBP10.63□□□□□ -0.71
UBE4B-210ENST00000488228 LGALS13Q9UHV8 139 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 ASB1Q9Y576 335 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 B3GALT1Q9Y5Z6 326 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 TMEM150CB9EJG8 249 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 TAPBPO15533 448 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 CCNDBP1O95273 360 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 TIAF1O95411 115 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 MT-ND3P03897 115 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 CTSBP07858 339 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 RBMS1P29558 406 aaKnown RBP10.62□□□□□ -0.71
UBE4B-210ENST00000488228 GDF5P43026 501 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 SLC6A12P48065 614 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 HSPA7P48741 367 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 AGTR2P50052 363 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 MC2RQ01718 297 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 RASA2Q15283 850 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 TSNAXIP1Q2TAA8 658 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 KRT71Q3SY84 523 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 BEND6Q5SZJ8 279 aaPredicted RBP10.62□□□□□ -0.71
UBE4B-210ENST00000488228 CAPN13Q6MZZ7 669 aaPredicted RBP10.62□□□□□ -0.71
UBE4B-210ENST00000488228 FIGLAQ6QHK4 219 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 ADCK2Q7Z695 626 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 C4orf33Q8N1A6 199 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 RIBC1Q8N443 379 aaPredicted RBP10.62□□□□□ -0.71
UBE4B-210ENST00000488228 STAG3L4Q8TBR4 150 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 CABS1Q96KC9 395 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 ZIM3Q96PE6 472 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 SYNPO2LQ9H987 977 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 PDE7BQ9NP56 450 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 FGF21Q9NSA1 209 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 CELSR3Q9NYQ7 3312 aa10.62□□□□□ -0.71
UBE4B-210ENST00000488228 OR2A25A4D2G3 310 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 CDRT15L2A8MXV6 281 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 CTSVO60911 334 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
UBE4B-210ENST00000488228 WDR47O94967 919 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 FKBP9O95302 570 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 CDH1P12830 882 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 MTHFD2P13995 350 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 GFAPP14136 432 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 ZNF28P17035 718 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 CCND1P24385 295 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 SLC5A2P31639 672 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 GABRA4P48169 554 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 HNMTP50135 292 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 RAB15P59190 212 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 ACY1Q03154 408 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 PRDX1Q06830 199 aaKnown RBP10.61□□□□□ -0.71
UBE4B-210ENST00000488228 ACAP2Q15057 778 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 TBC1D25Q3MII6 688 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 TMTC4Q5T4D3 741 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 ZNF425Q6IV72 752 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 C16orf46Q6P387 395 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 IGF2-ASQ6U949 168 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 LCTLQ6UWM7 567 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 RNF44Q7L0R7 432 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 THOC6Q86W42 341 aaKnown RBP10.61□□□□□ -0.71
UBE4B-210ENST00000488228 PAQR7Q86WK9 346 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 C17orf64Q86WR6 236 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 PLD3Q8IV08 490 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 OR1L3Q8NH93 324 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 RHEBL1Q8TAI7 183 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 ACMSDQ8TDX5 336 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 UBTD2Q8WUN7 234 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 ZCCHC14Q8WYQ9 949 aaKnown RBP10.61□□□□□ -0.71
UBE4B-210ENST00000488228 ZNF501Q96CX3 271 aaPredicted RBP10.61□□□□□ -0.71
UBE4B-210ENST00000488228 TCTN2Q96GX1 697 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 SLC46A1Q96NT5 459 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 FCRL4Q96PJ5 515 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 TAAR9Q96RI9 348 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 DDA1Q9BW61 102 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 PCBD2Q9H0N5 130 aa10.61□□□□□ -0.71
UBE4B-210ENST00000488228 FANCEQ9HB96 536 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms