RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 EFCAB3Q8N7B9 438 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 GALNT11Q8NCW6 608 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 PNPLA2Q96AD5 504 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 NACC2Q96BF6 587 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 SIGLEC10Q96LC7 697 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 OSBPL9Q96SU4 736 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 NAP1L3Q99457 506 aaPredicted RBP18.48■□□□□ 0.55
CD55-209ENST00000488171 PKP4Q99569 1192 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 DPH7Q9BTV6 452 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 ACAT2Q9BWD1 397 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 ZNF552Q9H707 407 aaPredicted RBP18.48■□□□□ 0.55
CD55-209ENST00000488171 CTSFQ9UBX1 484 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 FAM169AQ9Y6X4 670 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 ANKRD12Q6UB98 2062 aa18.48■□□□□ 0.55
CD55-209ENST00000488171 HYKKA2RU49 373 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 PHF2O75151 1096 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 VPS4BO75351 444 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 MMP11P24347 488 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 CMPK1P30085 196 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 SLC1A2P43004 574 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 SOX8P57073 446 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 INPP5JQ15735 1006 aaPredicted RBP18.47■□□□□ 0.55
CD55-209ENST00000488171 FAM214AQ32MH5 1076 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 ACTRT1Q8TDG2 376 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 SMPDL3AQ92484 453 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 FAM114A2Q9NRY5 505 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 KLHL42Q9P2K6 505 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 ZC3H7BQ9UGR2 993 aaKnown RBP18.47■□□□□ 0.55
CD55-209ENST00000488171 VPS4AQ9UN37 437 aa18.47■□□□□ 0.55
CD55-209ENST00000488171 IGKV1-8A0A0C4DH67 115 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 SOCS6O14544 535 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 CATP04040 527 aaKnown RBP18.46■□□□□ 0.55
CD55-209ENST00000488171 GNLYP22749 145 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 CUL1Q13616 776 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 ARHGAP19Q14CB8 494 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 NAA25Q14CX7 972 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 LONRF1Q17RB8 773 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 TTLL9Q3SXZ7 439 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 SHISA6Q6ZSJ9 500 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 KCNJ9Q92806 393 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 ZFYVE21Q9BQ24 234 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 SOX17Q9H6I2 414 aaPredicted RBP18.46■□□□□ 0.55
CD55-209ENST00000488171 SYNPO2LQ9H987 977 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 SLAMF7Q9NQ25 335 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 C20orf96Q9NUD7 363 aaPredicted RBP18.46■□□□□ 0.55
CD55-209ENST00000488171 STOX2Q9P2F5 926 aaPredicted RBP18.46■□□□□ 0.55
CD55-209ENST00000488171 CDC23Q9UJX2 597 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 FBXL4Q9UKA2 621 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 HS3ST3B1Q9Y662 390 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 MAD1L1Q9Y6D9 718 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 MAU2Q9Y6X3 613 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 SHANK1Q9Y566 2161 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 PTPN13Q12923 2485 aa18.46■□□□□ 0.55
CD55-209ENST00000488171 DOPEY2Q9Y3R5 2298 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 VSTM2BA6NLU5 285 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 SLC16A8O95907 504 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 RPA3P35244 121 aaPredicted RBP18.45■□□□□ 0.54
CD55-209ENST00000488171 FNTAP49354 379 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 PNLIPRP1P54315 467 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 PRTGQ2VWP7 1150 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 RNASEH2BQ5TBB1 312 aaKnown RBP18.45■□□□□ 0.54
CD55-209ENST00000488171 IGFL3Q6UXB1 125 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 PAQR7Q86WK9 346 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 PPIL6Q8IXY8 311 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 FBXO15Q8NCQ5 510 aaPredicted RBP18.45■□□□□ 0.54
CD55-209ENST00000488171 PPFIBP2Q8ND30 876 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 GRK7Q8WTQ7 553 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 ASB11Q8WXH4 323 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 C10orf90Q96M02 699 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 PLCD4Q9BRC7 762 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 MRPS30Q9NP92 439 aaKnown RBP18.45■□□□□ 0.54
CD55-209ENST00000488171 ATP13A2Q9NQ11 1180 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 NXT1Q9UKK6 140 aaKnown RBP18.45■□□□□ 0.54
CD55-209ENST00000488171 DHRS7Q9Y394 339 aa18.45■□□□□ 0.54
CD55-209ENST00000488171 H0YGG7 62 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 GFYI3L273 518 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 ALOX12BO75342 701 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 HAUS5O94927 633 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 ALPPP05187 535 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 EIF2S1P05198 315 aaKnown RBP18.44■□□□□ 0.54
CD55-209ENST00000488171 MPC1LP0DKB6 136 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 HSD17B2P37059 387 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 ARF3P61204 181 aaPredicted RBP18.44■□□□□ 0.54
CD55-209ENST00000488171 MPP1Q00013 466 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 AIMP2Q13155 320 aaKnown RBP18.44■□□□□ 0.54
CD55-209ENST00000488171 PLEKHN1Q494U1 663 aaPredicted RBP18.44■□□□□ 0.54
CD55-209ENST00000488171 KIRREL2Q6UWL6 708 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 CYHR1Q6ZMK1 362 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 LMNTD2Q8IXW0 634 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 CD200R1Q8TD46 325 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 ZNF480Q8WV37 535 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 GPR21Q99679 349 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 CCDC68Q9H2F9 335 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 ZBTB20Q9HC78 741 aaPredicted RBP18.44■□□□□ 0.54
CD55-209ENST00000488171 ZNF304Q9HCX3 659 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 TAC3Q9UHF0 121 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 FBXO5Q9UKT4 447 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 SNX12Q9UMY4 172 aa18.44■□□□□ 0.54
CD55-209ENST00000488171 E7ENX8 843 aa18.43■□□□□ 0.54
CD55-209ENST00000488171 KLHL41O60662 606 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms