RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ANOS1P23352 680 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 SLC6A6P31641 620 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 MC5RP33032 325 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 UBE2HP62256 183 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 CAMK2DQ13557 499 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 SMC1AQ14683 1233 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 WDR43Q15061 677 aaKnown RBP eCLIP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 PTPN14Q15678 1187 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 PKN2Q16513 984 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 ZC2HC1CQ53FD0 456 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 CCDC92Q53HC0 331 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 HECTD3Q5T447 861 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 ZSCAN25Q6NSZ9 544 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 FAM198BQ6UWH4 519 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 LINGO4Q6UY18 593 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 GBP6Q6ZN66 633 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 DET1Q7L5Y6 550 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 ISCA2Q86U28 154 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 THNSL1Q8IYQ7 743 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 CEP57L1Q8IYX8 460 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 ARHGAP24Q8N264 748 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 CHCHD4Q8N4Q1 142 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 PI4KAP1Q8N8J0 262 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 NAT8LQ8N9F0 302 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 TRIML1Q8N9V2 468 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 OR1J1Q8NGS3 322 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 OR13J1Q8NGT2 312 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 FCAMRQ8WWV6 532 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 MRPS27Q92552 414 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 FBXO17Q96EF6 278 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 GBP5Q96PP8 586 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 BTBD10Q9BSF8 475 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 NAA11Q9BSU3 229 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 TRIM6Q9C030 488 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 VN1R1Q9GZP7 353 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 DDX19BQ9UMR2 479 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 SMC3Q9UQE7 1217 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 PADI2Q9Y2J8 665 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 WDR81Q562E7 1941 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 DNMT1P26358 1616 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 EIF4G3O43432 1585 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ADGRL1O94910 1474 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ADGRL2O95490 1459 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 PDS5BQ9NTI5 1447 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 MAP3K5Q99683 1374 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 TTC41PQ6P2S7 1318 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 A0A087WYN8 130 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 A0A1B0GUA9 196 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 URADA6NGE7 173 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 OR10H2O60403 315 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 TOMM70O94826 608 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 SP1P08047 785 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 FDPSP14324 419 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 LIFP15018 202 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 PTAFRP25105 342 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 PPP2R1AP30153 589 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 LGALS3BPQ08380 585 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 PPP2R5CQ13362 524 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 TMED1Q13445 227 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 TAF13Q15543 124 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 TPD52L1Q16890 204 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 FILIP1LQ4L180 1135 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 HSP90B2PQ58FF3 399 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 IL27RAQ6UWB1 636 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 RBM43Q6ZSC3 357 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ADCK2Q7Z695 626 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 KIAA1328Q86T90 577 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ZNF329Q86UD4 541 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 APLFQ8IW19 511 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 CDK20Q8IZL9 346 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 SLC4A11Q8NBS3 891 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 CAMKVQ8NCB2 501 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 CCDC107Q8WV48 283 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 SYN2Q92777 582 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ZNF524Q96C55 264 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 SIPA1Q96FS4 1042 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 CDHR1Q96JP9 859 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 LRRC3BQ96PB8 259 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 S1PR5Q9H228 398 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ARRDC1-AS1Q9H2J1 176 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ZWILCHQ9H900 591 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 PRMT7Q9NVM4 692 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ADPRHL2Q9NX46 363 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 ZNF624Q9P2J8 865 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 TRPM1Q7Z4N2 1603 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 LAMC3Q9Y6N6 1575 aa3.55□□□□□ -1.84
ECHDC1-217ENST00000488087 CARMIL1Q5VZK9 1371 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 RPAP1Q9BWH6 1393 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 FAM170AA1A519 330 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 TMEM221A6NGB7 291 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 BLOC1S5-TXNDC5H3BN57 136 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 CCDC188H7C350 402 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 DNM1LO00429 736 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 LIN7AO14910 233 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 WDR46O15213 610 aaKnown RBP3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 SLC7A4O43246 635 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 AP5Z1O43299 807 aa3.54□□□□□ -1.84
ECHDC1-217ENST00000488087 PCDH7O60245 1069 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms