RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 OR4L1Q8NH43 312 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 CALR3Q96L12 384 aaKnown RBP18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZNF778Q96MU6 729 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 TMEM121Q9BTD3 319 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 A0A1W2PQ72 361 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 KRT87PA6NCN2 255 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 UNC5CO95185 931 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 CELA2AP08217 269 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 MST1P26927 711 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 BDKRB1P46663 353 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 SRSF11Q05519 484 aaKnown RBP18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 TMED2Q15363 201 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 MUM1Q2TAK8 710 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 CCSMST1Q4G0I0 132 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 FASTKD1Q53R41 847 aaKnown RBP18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 TTC23LQ6PF05 361 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 TMEM207Q6UWW9 146 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 LDB1Q86U70 411 aaPredicted RBP18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZNF808Q8N4W9 903 aaPredicted RBP18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 RNF214Q8ND24 703 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 OR6P1Q8NGX9 317 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 RAD51AP1Q96B01 352 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 LURAP1Q96LR2 239 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 RIMKLBQ9ULI2 386 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 R3HDM2Q9Y2K5 976 aaKnown RBP18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 MRPS2Q9Y399 296 aaKnown RBP18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 NFS1Q9Y697 457 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 DUSP10Q9Y6W6 482 aa18.52■□□□□ 0.56
SMPDL3A-202ENST00000487215 IGHV1-45A0A0A0MS14 117 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 GOLGA6L9A6NEM1 432 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 IDSB3KWA1 339 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 CCL21O00585 134 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 FFAR3O14843 346 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 GPR42O15529 346 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 BMP10O95393 424 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 C1orf105O95561 183 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 PTMAP06454 111 aaKnown RBP18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 SNRPB2P08579 225 aaKnown RBP18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 HTR1EP28566 365 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 CA7P43166 264 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 EMP2P54851 167 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 NAP1L1P55209 391 aaKnown RBP18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 ZNF630Q2M218 657 aaPredicted RBP18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 OR2A1Q8NGT9 310 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 SLC35B2Q8TB61 432 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 HMGCLL1Q8TB92 370 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 CHST11Q9NPF2 352 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 ABI3Q9P2A4 366 aa18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 TTC7AQ9ULT0 858 aaPredicted RBP18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 RUVBL2Q9Y230 463 aaKnown RBP18.51■□□□□ 0.55
SMPDL3A-202ENST00000487215 A0A1W2PPV9 198 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 WFS1O76024 890 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 RASAL1O95294 804 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 WDPCPO95876 746 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 GAS8O95995 478 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 UQCRHP07919 91 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 ERVK-10P10266 1014 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 CXCR2P25025 360 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 ADRA1DP25100 572 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 CYLC1P35663 651 aaPredicted RBP18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 PPARGP37231 505 aaPredicted RBP18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 GRIA1P42261 906 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 YBX1P67809 324 aaKnown RBP18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 PRAMEP78395 509 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 KLF1Q13351 362 aaPredicted RBP18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 DSG2Q14126 1118 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 PRTGQ2VWP7 1150 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 RPTNQ6XPR3 784 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 RAB42Q8N4Z0 105 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 CABS1Q96KC9 395 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 ZFYVE21Q9BQ24 234 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 TRIM5Q9C035 493 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 RIC8BQ9NVN3 520 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 TRPC4Q9UBN4 977 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 SEC14L3Q9UDX4 400 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 SH3BGRL2Q9UJC5 107 aa18.5■□□□□ 0.55
SMPDL3A-202ENST00000487215 OR2A25A4D2G3 310 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 ERI2A8K979 691 aaKnown RBP18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 PRMT5O14744 637 aaPredicted RBP18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 CRYABP02511 175 aaKnown RBP18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 COX6B1P14854 86 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 AARS2Q5JTZ9 985 aaKnown RBP18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 FAAH2Q6GMR7 532 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 PTRHD1Q6GMV3 140 aaKnown RBP18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 HIBCHQ6NVY1 386 aaPredicted RBP18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 FBXO42Q6P3S6 717 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 MTFR2Q6P444 385 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 PPP1R21Q6ZMI0 780 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 RIPOR1Q6ZS17 1223 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 AMER2Q8N7J2 671 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 LRRC57Q8N9N7 239 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 DNAJB8Q8NHS0 232 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 GSDMBQ8TAX9 411 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 SKA2Q8WVK7 121 aaPredicted RBP18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 YIPF2Q9BWQ6 316 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 RNF32Q9H0A6 362 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 SYNPO2LQ9H987 977 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 ETNK1Q9HBU6 452 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 MARCH4Q9P2E8 410 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms