RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 BANPQ8N9N5 519 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 UBTD2Q8WUN7 234 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 EXT2Q93063 718 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 TCTN2Q96GX1 697 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 APOPT1Q96IL0 206 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 RUFY1Q96T51 708 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 CD244Q9BZW8 370 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 NRSN2Q9GZP1 204 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 MRPS30Q9NP92 439 aaKnown RBP18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 KLK13Q9UKR3 277 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 SLC22A14Q9Y267 594 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 MSRB2Q9Y3D2 182 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 LOXL2Q9Y4K0 774 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 PCDHGA8Q9Y5G5 932 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 ACTL7BQ9Y614 415 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 SNRNP200O75643 2136 aaKnown RBP18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 SPTBN4Q9H254 2564 aa18.65■□□□□ 0.58
PCOLCE-208ENST00000487172 A0A1W2PNU3 283 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 B4E171 279 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 TK2O00142 265 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 PLD2O14939 933 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 SMIM24O75264 130 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 GFAPP14136 432 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 MAGP20916 626 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 TSPAN7P41732 249 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 ARL4DP49703 201 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 YBX1P67809 324 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 SHC2P98077 582 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 RELAQ04206 551 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 SETDB1Q15047 1291 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 PFKFB4Q16877 469 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 C18orf21Q32NC0 220 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 TMTC4Q5T4D3 741 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 FIGLAQ6QHK4 219 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 MARCH9Q86YJ5 346 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 FAM20CQ8IXL6 584 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 BMPERQ8N8U9 685 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 C19orf47Q8N9M1 422 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 OR4K3Q96R72 315 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 SMC6Q96SB8 1091 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 CAPS2Q9BXY5 557 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 STMN4Q9H169 189 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 TMBIM4Q9HC24 238 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 PDE7BQ9NP56 450 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 SSU72Q9NP77 194 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 FBXO8Q9NRD0 319 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 TMEM184CQ9NVA4 438 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 SIDT1Q9NXL6 827 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 CPSF2Q9P2I0 782 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 EMCNQ9ULC0 261 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 TNPO3Q9Y5L0 923 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 KCNE2Q9Y6J6 123 aa18.64■□□□□ 0.57
PCOLCE-208ENST00000487172 OR2A25A4D2G3 310 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 GOLGA6L10A6NI86 522 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 STX16-NPEPL1H3BU86 382 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 AGPSO00116 658 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 STX16O14662 325 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 WDR47O94967 919 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 FGF3P11487 239 aaPredicted RBP18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 TAC1P20366 129 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 MLLT3P42568 568 aaPredicted RBP18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 GDF5P43026 501 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 HSPA7P48741 367 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 MC2RQ01718 297 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 RTP5Q14D33 572 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 PCBP2Q15366 365 aaKnown RBP eCLIP18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 ZIC1Q15915 447 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 KIF26BQ2KJY2 2108 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 FCRL6Q6DN72 434 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 ZNF425Q6IV72 752 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 CYB5D1Q6P9G0 228 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 IGF2-ASQ6U949 168 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 LRRC70Q7Z2Q7 622 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 EXOC3L1Q86VI1 746 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 C17orf64Q86WR6 236 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 PRR11Q96HE9 360 aaPredicted RBP18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 DPH7Q9BTV6 452 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 CENPHQ9H3R5 247 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 POLR1BQ9H9Y6 1135 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 SLC6A20Q9NP91 592 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 ABCF3Q9NUQ8 709 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 OCIAD1Q9NX40 245 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 SOHLH2Q9NX45 425 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 GPRC5BQ9NZH0 403 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 SNX7Q9UNH6 387 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 SATB2Q9UPW6 733 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 PLLPQ9Y342 182 aa18.63■□□□□ 0.57
PCOLCE-208ENST00000487172 ADAMTS20P59510 1910 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 DCHS1Q96JQ0 3298 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 IGKV1-8A0A0C4DH67 115 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 EFCAB7A8K855 629 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 PLIN3O60664 434 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 PROCP04070 461 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 GABRA4P48169 554 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 NFKB2Q00653 900 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 ACY1Q03154 408 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 BPHLQ86WA6 291 aaPredicted RBP18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 DNAJC22Q8N4W6 341 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 ABHD11Q8NFV4 315 aa18.62■□□□□ 0.57
PCOLCE-208ENST00000487172 RDH11Q8TC12 318 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms