RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 PGAM1P18669 254 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 RPA3P35244 121 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-206ENST00000487091 PNLIPRP1P54315 467 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 MLLT10P55197 1068 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 PTK6Q13882 451 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 NADK2Q4G0N4 442 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 FRMPD2BQ6IN97 320 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 FBXO42Q6P3S6 717 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 CYHR1Q6ZMK1 362 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 COX15Q7KZN9 410 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 PPP1R32Q7Z5V6 425 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 CLEC1AQ8NC01 280 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 GABPB2Q8TAK5 448 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-206ENST00000487091 ZFYVE21Q9BQ24 234 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 NAT9Q9BTE0 207 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 DPH7Q9BTV6 452 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 ACAT2Q9BWD1 397 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 MRPS30Q9NP92 439 aaKnown RBP18.26■□□□□ 0.51
CLIP2-206ENST00000487091 ASIC3Q9UHC3 531 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 FLNCQ14315 2725 aa18.26■□□□□ 0.51
CLIP2-206ENST00000487091 RP1L1Q8IWN7 2480 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-206ENST00000487091 HYKKA2RU49 373 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 TTLL8A6PVC2 850 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 HAUS5O94927 633 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 TTC4O95801 387 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 SLC16A8O95907 504 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 MMP11P24347 488 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 SOX8P57073 446 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 PRDX1Q06830 199 aaKnown RBP18.25■□□□□ 0.51
CLIP2-206ENST00000487091 CUL1Q13616 776 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 NKG7Q16617 165 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 HSP90AA5PQ58FG0 334 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 VWA5B1Q5TIE3 1220 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 PRMT9Q6P2P2 845 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 SUSD1Q6UWL2 747 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 KCNMB4Q86W47 210 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 ATCAYQ86WG3 371 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 CD200R1Q8TD46 325 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 GPR21Q99679 349 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 EBNA1BP2Q99848 306 aaKnown RBP18.25■□□□□ 0.51
CLIP2-206ENST00000487091 PLCD4Q9BRC7 762 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 AARSD1Q9BTE6 412 aaKnown RBP18.25■□□□□ 0.51
CLIP2-206ENST00000487091 DDX47Q9H0S4 455 aaKnown RBP18.25■□□□□ 0.51
CLIP2-206ENST00000487091 SLC6A20Q9NP91 592 aa18.25■□□□□ 0.51
CLIP2-206ENST00000487091 IARS2Q9NSE4 1012 aaKnown RBP18.25■□□□□ 0.51
CLIP2-206ENST00000487091 UTP6Q9NYH9 597 aaKnown RBP18.25■□□□□ 0.51
CLIP2-206ENST00000487091 ZC3H7BQ9UGR2 993 aaKnown RBP18.25■□□□□ 0.51
CLIP2-206ENST00000487091 NXT1Q9UKK6 140 aaKnown RBP18.25■□□□□ 0.51
CLIP2-206ENST00000487091 LOC105369274A0A096LPK9 316 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 LOC102723532A0A0G2JNH3 316 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 E7ENX8 843 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 AGPSO00116 658 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 ZBTB14O43829 449 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 VPS26AO75436 327 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 SORBS2O94875 1100 aaKnown RBP18.24■□□□□ 0.51
CLIP2-206ENST00000487091 CCNDBP1O95273 360 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 F7P08709 466 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-206ENST00000487091 SKIV2L2P42285 1042 aaKnown RBP18.24■□□□□ 0.51
CLIP2-206ENST00000487091 EMP3P54852 163 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 FOXL2P58012 376 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 YBX1P67809 324 aaKnown RBP18.24■□□□□ 0.51
CLIP2-206ENST00000487091 MPP1Q00013 466 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 TAP2Q03519 686 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 RELAQ04206 551 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 CRYMQ14894 314 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 MYBPC3Q14896 1274 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 PRTGQ2VWP7 1150 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 UGT3A1Q6NUS8 523 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 OR4N4Q8N0Y3 316 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 GALNT16Q8N428 558 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 C2CD4AQ8NCU7 369 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-206ENST00000487091 ZNF480Q8WV37 535 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-206ENST00000487091 SPSB2Q99619 263 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 ATP13A2Q9NQ11 1180 aa18.24■□□□□ 0.51
CLIP2-206ENST00000487091 MDC1Q14676 2089 aaKnown RBP18.24■□□□□ 0.51
CLIP2-206ENST00000487091 VSTM2BA6NLU5 285 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 NRP2O60462 931 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 IVDP26440 423 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 OR1D4P47884 311 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 ABATP80404 500 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 DHX9Q08211 1270 aaKnown RBP18.23■□□□□ 0.51
CLIP2-206ENST00000487091 MUM1Q2TAK8 710 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 SPANXN3Q5MJ09 141 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 ICE2Q659A1 982 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 ZNF425Q6IV72 752 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 LRRC8EQ6NSJ5 796 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 JMJD6Q6NYC1 403 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-206ENST00000487091 SYDE1Q6ZW31 735 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-206ENST00000487091 PAQR7Q86WK9 346 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 TMEM151BQ8IW70 566 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 RBMXL3Q8N7X1 1067 aaKnown RBP18.23■□□□□ 0.51
CLIP2-206ENST00000487091 ZNF304Q9HCX3 659 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 TAC3Q9UHF0 121 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 DOPEY2Q9Y3R5 2298 aa18.23■□□□□ 0.51
CLIP2-206ENST00000487091 NUP210LQ5VU65 1888 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 IGKV1-8A0A0C4DH67 115 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 CLEC18AA5D8T8 446 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 H0YGG7 62 aa18.22■□□□□ 0.51
CLIP2-206ENST00000487091 IPO13O94829 963 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms