RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 C17orf53Q8N3J3 647 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 LINGO1Q96FE5 620 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 PWWP2AQ96N64 755 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 GBP5Q96PP8 586 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 DPH7Q9BTV6 452 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 CUTCQ9NTM9 273 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 ANKMY1Q9P2S6 941 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 SLC17A6Q9P2U8 582 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 CORO1CQ9ULV4 474 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 TP53TG5Q9Y2B4 290 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 MED16Q9Y2X0 877 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 PTRH2Q9Y3E5 179 aaKnown RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 A0A0J9YVX5 310 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 A0A1W2PPV9 198 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 H3BMH7 237 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 DSCR3O14972 297 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 PRICKLE3O43900 615 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 DNAJB5O75953 348 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 EIF2S1P05198 315 aaKnown RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 C8GP07360 202 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 PIM1P11309 404 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 SKIV2L2P42285 1042 aaKnown RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 RPL21P46778 160 aaKnown RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 RRADP55042 308 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 C2orf54Q08AI8 447 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 SP140Q13342 867 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 ATP1A4Q13733 1029 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 NKAIN1Q4KMZ8 207 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 RBM20Q5T481 1227 aaKnown RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 ICE2Q659A1 982 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 STEAP4Q687X5 459 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 RNF44Q7L0R7 432 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 MAATS1Q7Z4T9 603 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 GALNT7Q86SF2 657 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 APLFQ8IW19 511 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 ZBED8Q8IZ13 594 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 FBXO15Q8NCQ5 510 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 PPFIBP2Q8ND30 876 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 FBXO36Q8NEA4 188 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 OR2A1Q8NGT9 310 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 ZNF480Q8WV37 535 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 ASB11Q8WXH4 323 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 ZFYVE21Q9BQ24 234 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 DPH5Q9H2P9 285 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 SLC6A20Q9NP91 592 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 CCDC177Q9NQR7 707 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-208ENST00000486404 TLK1Q9UKI8 766 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 SNX24Q9Y343 169 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 TEX264Q9Y6I9 313 aa12.35□□□□□ -0.43
CHMP3-208ENST00000486404 FAM187AA6NFU0 413 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 PEX12O00623 359 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 FANCGO15287 622 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 SRPX2O60687 465 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-208ENST00000486404 CTSVO60911 334 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 CAPN1P07384 714 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 EZRP15311 586 aaKnown RBP12.34□□□□□ -0.43
CHMP3-208ENST00000486404 PGDP52209 483 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 CDKN2DP55273 166 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 ETF1P62495 437 aaKnown RBP12.34□□□□□ -0.43
CHMP3-208ENST00000486404 MRPS25P82663 173 aaKnown RBP12.34□□□□□ -0.43
CHMP3-208ENST00000486404 FAM214AQ32MH5 1076 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 WASHC2DQ5SRD0 308 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 PRAMEF13Q5VWM6 474 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 FAM45BPQ6NSW5 357 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 TRMT10BQ6PF06 316 aaKnown RBP12.34□□□□□ -0.43
CHMP3-208ENST00000486404 SYT10Q6XYQ8 523 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 CAPN12Q6ZSI9 719 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 ASB18Q6ZVZ8 466 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 MRGPREQ86SM8 312 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 METTL27Q8N6F8 245 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-208ENST00000486404 SPATA4Q8NEY3 305 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 OR2Y1Q8NGV0 311 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 FAM45AQ8TCE6 357 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 MCOLN3Q8TDD5 553 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 ADAMTS17Q8TE56 1095 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 EEF1AKMT1Q8WVE0 214 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 RERGQ96A58 199 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-208ENST00000486404 FKBP10Q96AY3 582 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 CABS1Q96KC9 395 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 IP6K3Q96PC2 410 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 SLC25A23Q9BV35 468 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 TRIM55Q9BYV6 548 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 TRIM4Q9C037 500 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 ING2Q9H160 280 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 KLK4Q9Y5K2 254 aa12.34□□□□□ -0.43
CHMP3-208ENST00000486404 HYKKA2RU49 373 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 OR2A25A4D2G3 310 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 E7ENX8 843 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 GFYI3L273 518 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 RAD51CO43502 376 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 NRP2O60462 931 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 AHSGP02765 367 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 HIST1H2AGP0C0S8 130 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-208ENST00000486404 NR1D1P20393 614 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 HIST1H2ADP20671 130 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 SAT1P21673 171 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 IMPA1P29218 277 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 IL2P60568 153 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 TBPL1P62380 186 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 ABATP80404 500 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms