RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MMADHCQ9H3L0 296 aaPredicted RBP10.95□□□□□ -0.66
SND1-212ENST00000485871 SEMA4BQ9NPR2 832 aaPredicted RBP10.95□□□□□ -0.66
SND1-212ENST00000485871 DNAJC11Q9NVH1 559 aa10.95□□□□□ -0.66
SND1-212ENST00000485871 PNPOQ9NVS9 261 aa10.95□□□□□ -0.66
SND1-212ENST00000485871 VTI1BQ9UEU0 232 aa10.95□□□□□ -0.66
SND1-212ENST00000485871 GMEB2Q9UKD1 530 aa10.95□□□□□ -0.66
SND1-212ENST00000485871 SH2B3Q9UQQ2 575 aa10.95□□□□□ -0.66
SND1-212ENST00000485871 SLC22A14Q9Y267 594 aa10.95□□□□□ -0.66
SND1-212ENST00000485871 TDRKHQ9Y2W6 561 aaKnown RBP10.95□□□□□ -0.66
SND1-212ENST00000485871 PCDHGA5Q9Y5G8 931 aa10.95□□□□□ -0.66
SND1-212ENST00000485871 COLEC10Q9Y6Z7 277 aa10.95□□□□□ -0.66
SND1-212ENST00000485871 TRBV23OR9-2A0A075B6M9 112 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 KCNE1BA0A087WTH5 132 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 PABPN1LA6NDY0 278 aaKnown RBP10.94□□□□□ -0.66
SND1-212ENST00000485871 TMEM233B4DJY2 109 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 FCHO1O14526 889 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 MLYCDO95822 493 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 EPB42P16452 691 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 PEBP1P30086 187 aaKnown RBP10.94□□□□□ -0.66
SND1-212ENST00000485871 HNRNPH1P31943 449 aaKnown RBP10.94□□□□□ -0.66
SND1-212ENST00000485871 HSD17B2P37059 387 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 MPLP40238 635 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 RAB28P51157 221 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 FOXA1P55317 472 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 PKNOX1P55347 436 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 MAZP56270 477 aaKnown RBP10.94□□□□□ -0.66
SND1-212ENST00000485871 GPR18Q14330 331 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 UGT3A2Q3SY77 523 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 METTL21CQ5VZV1 264 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 FBXW10Q5XX13 1052 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 LETMD1Q6P1Q0 360 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 LCTLQ6UWM7 567 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 THOC6Q86W42 341 aaKnown RBP10.94□□□□□ -0.66
SND1-212ENST00000485871 SYTL1Q8IYJ3 562 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 AFAP1L2Q8N4X5 818 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 GPR156Q8NFN8 814 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 FLVCR1-AS1Q8TAF5 88 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 SAP25Q8TEE9 199 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 CXorf40BQ96DE9 158 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 RILPQ96NA2 401 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 NTMT1Q9BV86 223 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 RAB11FIP5Q9BXF6 653 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 SHCBP1LQ9BZQ2 653 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 ILKAPQ9H0C8 392 aaPredicted RBP10.94□□□□□ -0.66
SND1-212ENST00000485871 NOL11Q9H8H0 719 aaKnown RBP10.94□□□□□ -0.66
SND1-212ENST00000485871 IPPKQ9H8X2 491 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 IL21RQ9HBE5 538 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 MID1IP1Q9NPA3 183 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.94□□□□□ -0.66
SND1-212ENST00000485871 CPNE7Q9UBL6 633 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 SLC6A14Q9UN76 642 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 CABIN1Q9Y6J0 2220 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 ATRXP46100 2492 aa10.94□□□□□ -0.66
SND1-212ENST00000485871 GOLGA8QA0A0J9YX86 632 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 GOLGA8OA6NCC3 632 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 B4DGG1 531 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 GOLGA8NF8WBI6 632 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 MATN2O00339 956 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 SLC22A2O15244 555 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 DFNA5O60443 496 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 OR4F21O95013 312 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 ESRRBO95718 433 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 CFIP05156 583 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 JUNP05412 331 aaKnown RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 ANXA6P08133 673 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 ESRRAP11474 423 aaPredicted RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 NPPBP16860 134 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 PRDX6P30041 224 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 SHMT2P34897 504 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 PIK3CGP48736 1102 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 ARRB1P49407 418 aaPredicted RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 RPL14P50914 215 aaKnown RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 CDC16Q13042 620 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 DEFB133Q30KQ1 61 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 HLA-BQ31612 363 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 GGTA1PQ4G0N0 100 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 TRIM61Q5EBN2 209 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 C6orf132Q5T0Z8 1188 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 KANK2Q63ZY3 851 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 CAPN13Q6MZZ7 669 aaPredicted RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 SUSD1Q6UWL2 747 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 SLC9B2Q86UD5 537 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 ARL14Q8N4G2 192 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 OR4F6Q8NGB9 312 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 MAPK15Q8TD08 544 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 JPH3Q8WXH2 748 aaPredicted RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 SMPDL3AQ92484 453 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 WDR34Q96EX3 536 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 PTCD3Q96EY7 689 aaKnown RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 FAR2Q96K12 515 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 CDK15Q96Q40 435 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 XKR8Q9H6D3 395 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 EML4Q9HC35 981 aaKnown RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 CCDC177Q9NQR7 707 aaPredicted RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 GPRC5BQ9NZH0 403 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 MARCOQ9UEW3 520 aaPredicted RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 TRIM33Q9UPN9 1127 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 CHD6Q8TD26 2715 aa10.93□□□□□ -0.66
SND1-212ENST00000485871 MDC1Q14676 2089 aaKnown RBP10.93□□□□□ -0.66
SND1-212ENST00000485871 FAM221BA6H8Z2 402 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms