RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SEC61A1P61619 476 aaKnown RBP4.23□□□□□ -1.73
VPS13A-211ENST00000484581 BNC1Q01954 994 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 MFAP5Q13361 173 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 GAMTQ14353 236 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 STXBP2Q15833 593 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 UGT3A2Q3SY77 523 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 FAM46CQ5VWP2 391 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 FAM166AQ6J272 317 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 NEK5Q6P3R8 708 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 PACS1Q6VY07 963 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 RAD9BQ6WBX8 426 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 ANKRD46Q86W74 232 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 KDM8Q8N371 416 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 PGBD5Q8N414 524 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 NEK11Q8NG66 645 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 OR13J1Q8NGT2 312 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 FGFBP3Q8TAT2 258 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 SLC20A1Q8WUM9 679 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 FIG4Q92562 907 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 PYCR2Q96C36 320 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 THOC1Q96FV9 657 aaKnown RBP4.23□□□□□ -1.73
VPS13A-211ENST00000484581 CFAP36Q96G28 342 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 TMEM19Q96HH6 336 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 FAM71F1Q96KD3 344 aaPredicted RBP4.23□□□□□ -1.73
VPS13A-211ENST00000484581 RASL10BQ96S79 203 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 KCNK16Q96T55 309 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 CDK19Q9BWU1 502 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 TSPYL1Q9H0U9 437 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 GPR173Q9NS66 373 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 ZNF701Q9NV72 531 aaPredicted RBP4.23□□□□□ -1.73
VPS13A-211ENST00000484581 SPHK1Q9NYA1 384 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 TRIM10Q9UDY6 481 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 SH3BGRL2Q9UJC5 107 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 ZNF580Q9UK33 172 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 KCNK6Q9Y257 313 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 DLGAP4Q9Y2H0 992 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 TMED3Q9Y3Q3 217 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 JRKLQ9Y4A0 524 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 TRIM17Q9Y577 477 aa4.23□□□□□ -1.73
VPS13A-211ENST00000484581 A0A0G2JNG1 304 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 RGSL1A5PLK6 1076 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 TMEM150CB9EJG8 249 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 E9PI62 339 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 LDB3O75112 727 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 KDM4BO94953 1096 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 LIPFP07098 398 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 KRT19P08727 400 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 TMEM191BP0C7N4 346 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 CKMT2P17540 419 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 ARF4P18085 180 aaPredicted RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 AHRP35869 848 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 GNL1P36915 607 aaPredicted RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 MNDAP41218 407 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 OR3A1P47881 315 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 ISL1P61371 349 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 RPS18P62269 152 aaKnown RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 EEF1A1P68104 462 aaKnown RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 SULT2A1Q06520 285 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 TRAF2Q12933 501 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 TSTA3Q13630 321 aaPredicted RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 KIR2DS5Q14953 304 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 RBBP7Q16576 425 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 CCNYL2Q5T2Q4 361 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 EEF1A1P5Q5VTE0 462 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 MFSD7Q6UXD7 560 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 COLCA1Q6ZS62 124 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 ASB18Q6ZVZ8 466 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 C1orf186Q6ZWK4 172 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 ANKRD33Q7Z3H0 272 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 FJX1Q86VR8 437 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 ZDHHC17Q8IUH5 632 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 MMD2Q8IY49 270 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 BATF2Q8N1L9 274 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 CRYBG2Q8N1P7 616 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 PRR26Q8N8Z3 221 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 CLEC1AQ8NC01 280 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 ZBTB44Q8NCP5 570 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 KIAA0895Q8NCT3 520 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 OR4K1Q8NGD4 311 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 OR52E1Q8NGJ3 308 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 EXOC6Q8TAG9 804 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 IRGQQ8WZA9 623 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 TMEM186Q96B77 213 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 ABHD8Q96I13 439 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 C17orf62Q9BQA9 187 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 ZNF559Q9BR84 538 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 PANK2Q9BZ23 570 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 NAPBQ9H115 298 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 LIN28AQ9H9Z2 209 aaKnown RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 FAM118AQ9NWS6 357 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 HIF1ANQ9NWT6 349 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 SPASTQ9UBP0 616 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 NOCTQ9UK39 431 aaKnown RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 TSPAN16Q9UKR8 245 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 CCPG1Q9ULG6 757 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 FOXA2Q9Y261 457 aaPredicted RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 EXOC6BQ9Y2D4 811 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 STRAPQ9Y3F4 350 aaKnown RBP4.22□□□□□ -1.73
VPS13A-211ENST00000484581 KIAA1217Q5T5P2 1943 aa4.22□□□□□ -1.73
VPS13A-211ENST00000484581 DHX29Q7Z478 1369 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms