RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SLC19A2O60779 497 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 RASAL1O95294 804 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 OR56A5P0C7T3 313 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 EMP2P54851 167 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 FASTKQ14296 549 aaKnown RBP12.25□□□□□ -0.45
UBR4-213ENST00000483922 SYT16Q17RD7 645 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 PRTGQ2VWP7 1150 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 RPTNQ6XPR3 784 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 RNF44Q7L0R7 432 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 LDB1Q86U70 411 aaPredicted RBP12.25□□□□□ -0.45
UBR4-213ENST00000483922 CDKL3Q8IVW4 592 aaPredicted RBP12.25□□□□□ -0.45
UBR4-213ENST00000483922 CHERPQ8IWX8 916 aaKnown RBP12.25□□□□□ -0.45
UBR4-213ENST00000483922 AMER3Q8N944 861 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 OR2L3Q8NG85 312 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 HDAC10Q969S8 669 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 POM121Q96HA1 1249 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 MIPEPQ99797 713 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBR4-213ENST00000483922 ZNF700Q9H0M5 742 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 RUVBL2Q9Y230 463 aaKnown RBP12.25□□□□□ -0.45
UBR4-213ENST00000483922 R3HDM2Q9Y2K5 976 aaKnown RBP12.25□□□□□ -0.45
UBR4-213ENST00000483922 PCDHA3Q9Y5H8 950 aa12.25□□□□□ -0.45
UBR4-213ENST00000483922 A0A0U1RQJ8 604 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 PJA2O43164 708 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 FOXS1O43638 330 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 PRAMEF2O60811 474 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 MFAP3LO75121 409 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 SLCO2B1O94956 709 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 GOT2P00505 430 aaKnown RBP12.24□□□□□ -0.45
UBR4-213ENST00000483922 EIF2S1P05198 315 aaKnown RBP12.24□□□□□ -0.45
UBR4-213ENST00000483922 AOAHP28039 575 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 SLC26A3P40879 764 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 GRIA1P42261 906 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 GDF10P55107 478 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 PLOD1Q02809 727 aaPredicted RBP12.24□□□□□ -0.45
UBR4-213ENST00000483922 OCA2Q04671 838 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 PARP6Q2NL67 630 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 SYTL3Q4VX76 610 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 PRMT9Q6P2P2 845 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 TMEM205Q6UW68 189 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 Q6ZPB1 254 aaPredicted RBP12.24□□□□□ -0.45
UBR4-213ENST00000483922 DCUN1D3Q8IWE4 304 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 TAB3Q8N5C8 712 aaPredicted RBP12.24□□□□□ -0.45
UBR4-213ENST00000483922 SLC22A18Q96BI1 424 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 MTFMTQ96DP5 389 aaKnown RBP12.24□□□□□ -0.45
UBR4-213ENST00000483922 NPAS2Q99743 824 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 TMEM121Q9BTD3 319 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 CARD6Q9BX69 1037 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 HES7Q9BYE0 225 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 OSBPL8Q9BZF1 889 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 RNF32Q9H0A6 362 aa12.24□□□□□ -0.45
UBR4-213ENST00000483922 IGKV1-8A0A0C4DH67 115 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 OR2A25A4D2G3 310 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 OR5H15A6NDH6 313 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 RCCD1A6NED2 376 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 OR2W5A6NFC9 320 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 H0YGG7 62 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 QSOX1O00391 747 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 ADAM10O14672 748 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 MAN1A2O60476 641 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 DIAPH2O60879 1101 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 WFS1O76024 890 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 C1orf105O95561 183 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 CRYABP02511 175 aaKnown RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 AGAP20933 346 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 FBLP22087 321 aaKnown RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 CTNNA1P35221 906 aaKnown RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 PTPN7P35236 360 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 MAGEA1P43355 309 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 BDKRB1P46663 353 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 COPS2P61201 443 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 ARF3P61204 181 aaPredicted RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 HKDC1Q2TB90 917 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 FCRLBQ6BAA4 426 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 UNC5DQ6UXZ4 953 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 SPNS2Q8IVW8 549 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 VSTM4Q8IW00 320 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 FAM71DQ8N9W8 422 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 OR52K1Q8NGK4 314 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 ASZ1Q8WWH4 475 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 ALG3Q92685 438 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 C14orf79Q96F83 325 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 SIGLEC12Q96PQ1 595 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 TREX2Q9BQ50 279 aaPredicted RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 ENKD1Q9H0I2 346 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 INTS7Q9NVH2 962 aaKnown RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 ZNHIT6Q9NWK9 470 aaKnown RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 STMN3Q9NZ72 180 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 MARCH4Q9P2E8 410 aaPredicted RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 TRPC4Q9UBN4 977 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 RUVBL1Q9Y265 456 aaKnown RBP12.23□□□□□ -0.45
UBR4-213ENST00000483922 EFR3BQ9Y2G0 817 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 MEMO1Q9Y316 297 aa12.23□□□□□ -0.45
UBR4-213ENST00000483922 IGHV3-20A0A0C4DH32 117 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 GOLGA6L22H0YM25 854 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 CLDN14O95500 239 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 FDXRP22570 491 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 SSTR2P30874 369 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 TPM4P67936 248 aa12.22□□□□□ -0.45
UBR4-213ENST00000483922 MAT1AQ00266 395 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms