RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 CUL9Q8IWT3 2517 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 DYTNA2CJ06 578 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 KRT87PA6NCN2 255 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 KIF1CO43896 1103 aaKnown RBP16.64■□□□□ 0.25
MRPL28-210ENST00000483764 RPS17P08708 135 aaKnown RBP16.64■□□□□ 0.25
MRPL28-210ENST00000483764 IDO1P14902 403 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 GNSP15586 552 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 GGT5P36269 586 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 HALP42357 657 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 HSPA7P48741 367 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 PKNOX1P55347 436 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 C21orf59P57076 290 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 CLCA4Q14CN2 919 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 ANGPT1Q15389 498 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 TEAD4Q15561 434 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 UGT3A2Q3SY77 523 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 ABRAXAS1Q6UWZ7 409 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 RPS27LQ71UM5 84 aaKnown RBP16.64■□□□□ 0.25
MRPL28-210ENST00000483764 PDSS2Q86YH6 399 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 PQLC1Q8N2U9 271 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 ADCY4Q8NFM4 1077 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 OR5AR1Q8NGP9 310 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 OR5K2Q8NHB8 316 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 UBTD2Q8WUN7 234 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 ATL1Q8WXF7 558 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 RAD51AP1Q96B01 352 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 FBXL8Q96CD0 374 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 CCDC124Q96CT7 223 aaKnown RBP16.64■□□□□ 0.25
MRPL28-210ENST00000483764 ZC3H10Q96K80 434 aaKnown RBP16.64■□□□□ 0.25
MRPL28-210ENST00000483764 PKP4Q99569 1192 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 SHCBP1LQ9BZQ2 653 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 CD244Q9BZW8 370 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 TRIT1Q9H3H1 467 aaKnown RBP16.64■□□□□ 0.25
MRPL28-210ENST00000483764 CAAP1Q9H8G2 361 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 SPAG4Q9NPE6 437 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 APOBEC3BQ9UH17 382 aaKnown RBP16.64■□□□□ 0.25
MRPL28-210ENST00000483764 ASB1Q9Y576 335 aa16.64■□□□□ 0.25
MRPL28-210ENST00000483764 A0A1B0GTW7 788 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 H0YJX3 145 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 E2F3O00716 465 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 NRP2O60462 931 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 SKAP2O75563 359 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-210ENST00000483764 JUNP05412 331 aaKnown RBP16.63■□□□□ 0.25
MRPL28-210ENST00000483764 NME1P15531 152 aaKnown RBP16.63■□□□□ 0.25
MRPL28-210ENST00000483764 LBPP18428 481 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 CDH13P55290 713 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 PSME3P61289 254 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 RPE65Q16518 533 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 AGKQ53H12 422 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 OGFRL1Q5TC84 451 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-210ENST00000483764 TMEM198Q66K66 360 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 DCUN1D3Q8IWE4 304 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 TBC1D21Q8IYX1 336 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 ZBTB44Q8NCP5 570 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 OR9A1PQ8NGU1 263 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 ZNF483Q8TF39 744 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-210ENST00000483764 DUS3LQ96G46 650 aaKnown RBP16.63■□□□□ 0.25
MRPL28-210ENST00000483764 FERD3LQ96RJ6 166 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 TMEM79Q9BSE2 394 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 EFHD1Q9BUP0 239 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 MUC13Q9H3R2 512 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 MID1IP1Q9NPA3 183 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 IMP3Q9NV31 184 aaKnown RBP16.63■□□□□ 0.25
MRPL28-210ENST00000483764 GID8Q9NWU2 228 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 CIDEBQ9UHD4 219 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 PCTPQ9UKL6 214 aa16.63■□□□□ 0.25
MRPL28-210ENST00000483764 CNOT11Q9UKZ1 510 aaKnown RBP16.63■□□□□ 0.25
MRPL28-210ENST00000483764 GON4LQ3T8J9 2241 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 FAM86C2PA6NEL3 165 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 OR52A4PA6NMU1 304 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 TMEM233B4DJY2 109 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 TNFRSF10AO00220 468 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 CRCPO75575 148 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 STK16O75716 305 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 EML2O95834 649 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 SLC16A8O95907 504 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 UROSP10746 265 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 PIM1P11309 404 aaPredicted RBP16.62■□□□□ 0.25
MRPL28-210ENST00000483764 GDF5P43026 501 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 CLCQ05315 142 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 PRKG2Q13237 762 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 TRIM25Q14258 630 aaKnown RBP16.62■□□□□ 0.25
MRPL28-210ENST00000483764 ZXDCQ2QGD7 858 aaPredicted RBP16.62■□□□□ 0.25
MRPL28-210ENST00000483764 PRRT3Q5FWE3 981 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 TCHHL1Q5QJ38 904 aaPredicted RBP16.62■□□□□ 0.25
MRPL28-210ENST00000483764 TAF8Q7Z7C8 310 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 MIER2Q8N344 545 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 PYDC1Q8WXC3 89 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 GATA6Q92908 595 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 LRGUKQ96M69 825 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 NSUN5Q96P11 429 aaKnown RBP16.62■□□□□ 0.25
MRPL28-210ENST00000483764 TRIM15Q9C019 465 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 TMEM74BQ9NUR3 256 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 RIC8BQ9NVN3 520 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 SCHIP1Q9P0W5 487 aaPredicted RBP16.62■□□□□ 0.25
MRPL28-210ENST00000483764 STOX2Q9P2F5 926 aaPredicted RBP16.62■□□□□ 0.25
MRPL28-210ENST00000483764 SUSD2Q9UGT4 822 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 CROTQ9UKG9 612 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 PILRBQ9UKJ0 227 aa16.62■□□□□ 0.25
MRPL28-210ENST00000483764 A0A1B0GVT2 93 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms